| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3079 |
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| Symbol | |
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| ID | 1221942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3315237 |
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| End bp | 3318221 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239496 |
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| Product | composite two component sensor histidine kinase and response regulator hybrid transcription regulator protein |
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| Protein accession | NP_521200 |
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| Protein GI | 17547798 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0449118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA TGCTCCGGCG CGCCCTTCCG GCGCCTGCGC ACCTCTGGCG GCGTGGCCGC
ACGGCCTTGC TGCTGTGCGC CACCGCCATC GCACTGCTGA CCACCTCCGA CCGCGCACAG
GCCGACCGCA CAACCCGGGC GCTGCCGCCC ATGGGCCACC CGCTGATGCC GTCTGCCGCG
GCACAGATGG CAAGCGGCAC GCCGGCGGCG GCGATCGCGT TGTGGACGCT GGCCGTGCTC
TCCATGCGGC ACGTGCAACT GCGCCGCGAA AACCGGCGGC GGCGGCGTGC CGAAGCCGAC
CTTGCCCGGC AACTGGACTT CCACCACAGG CTGCTGGAAT CGCTGCCGTT TCCGCTGGCC
GCCCAGGACA CGCAACACCG CTACGTGGCG GTCAATGCCG CGTTCTGCCA CCTGTTCGGC
CAGCCGCGCG AAGCACTACT CGGACGCACC CCCGCGCATC TCGGATGGCG TTGCGCACAC
ACGGCCGCAC GCGCGCAGGA CATCGACCGC CGCGCGACCG CCGCCAGCCA GGGCGCGTGC
GAGGCACTGA CCATCACGGC CGCGGACGGC CGCGAGCGCC ACGTCCTGTA TTGGGTGGCG
CCGGTCCACG GGCCCGATGG CCGGCCGGGC GGCACGGTGG CATCGCTGAT CGACATCGAC
GGGATCCGGG ACGCGCAGGC GCCCGCCGAA CAGCGGGCGC AGCGCCTGCA TGAACTCACC
GAATCCCTGC CAGCGCTGGT GTGCCAGTTC GAGATGCGAC CGGGCACGGC GGCGCGGGGC
CGGATGCGCC ATCTTGCCGG CAACGCCAGC GAGACGCTGG GTGCACCGGC CGGCAAGGCG
CGGGGCCGCC TGCCCTCGCC CGCGCGGTTG GTCCATCGGG ATGACCGCCA ACGCATGCGC
GGCGCCGCGC TGCAATCCGC CGCGCAGCTC ACGCTGCTCG ATCAGCAGTT CCGGCACGGG
AACGGCGACG GCCCGGTCCG CTGGCTACAT ATCCGTGCGC GTCCCCGTCG CGGAGCCGAC
GGATGCACGG TCTGGAACGG CTACCTGCGC GACGTCACCG CAGAGCGCGC GCAGGCCGAT
GCGCTGGTGT CGGCCAGGCA GGCGGCCGAA TCCGCGCTGC GCGCCAAGGA CCGCTTCCTG
GCCACGATGA GCCACGAGAT CCGCACCCCG ATGAACGGCG TGCTCGGCCT GGTGGAACTG
CTGCTGCAAA CCCGGCTGGA ACGCGAGCAG CAGCGGATGA TGACACTGGT GCAAGAGTCG
AGCCGGGCGC TGTTGCACGT CCTCGACGAC ATCCTCGACT ACGCAAAGAT CGAGGCCGAC
CGCCTGTCCA TCACGCCCGC GCCGACCGAC CTGCGCGCAC TGCTCGACAG CACGGTCGGC
CTGCTGGCAA GCCGCGCCCA TGAACGGTCG CTGGCGGTAC GGGTGGACGT GGATGCAGCC
GTGCCGGCCA CGGTGTCGGT GGACGGTATG CGCCTGCGCC AGGTGCTGTG CAACCTCCTG
TCCAATGCCA TCAAGTTCAC CGAACACGGC AGCGTGCGCC TCAGCGCCAA ATGCATGGAA
ACGGCCGCCG ACACGGTCCA CCTCATCATC CGGGTCACCG ACACCGGTAT CGGCATTGCG
CCGGAAGCCC AGGCCACGCT ATTCACGCCA TTCGTACAGG CCGACAGCAC CATCACACAC
CGCCAGTGCG GCACCGGCCT CGGTCTGGCC ATCTCGCGCC AGCTCGCCCG GCTGATGGGC
GGTTCGCTCG ACATGGACAG CACGCCGAAC GTCGGCACGA CGCTCACGTT GCGACTGGAG
GTGCCGGTCG TCGACGCACG CTATCGGCTG CCGCGCCTGG CGAGCGCAAC GGTGCGCGTG
GCCGTCGACG ACGACACCTG CCGCCACGGG CTTGAGCAGT TTGCCGTCGC GGCCGGGTTG
CGGGTCGTCC ATACAGGCAC TGCCGATCTC ACCCTGGTGG ACAGCGTACG CGCGCCAGCG
GATGCGCCCC GCATCGTGCC CGTCACCGGA GACGCGCCCT ACACCGGGCC CGGCCGCAGC
ATCCCGCGGC CGGAGGCCCT CAGCACCAAT CCGCTGAACT GGCAGGCGTT CGTGCAGGCC
TGCGATACCG CGCTCGCCCG GCCCGCCGAT GGCCACGCCG CCAACGGCAT GCCCAAGAGC
CGCACCGTGC CGGAGCCGGC ACCCGCTGCC GAAACCCCGG GCATGCACAT CCTGGTCGCC
GAAGACCACC CGATCAACCG CGAGCTGATC ACCAGGCAAC TGCGGCTGCT TGGCTACCGC
GTAACCCTGG CCGAGGATGG TGCCGCCGCA CTGCAGCGCC TGTGCGAGAC CCGCTTCGAC
GCCCTGCTGA CCGATTGCTG CATGCCGCGG CTGGATGGCT TCGATCTCGC CCGGCAGATC
CGCCAGCGGG AACAGCAAGC GCCCGGCGGT CGACGCCTGC CGATCCTCGC CATCACGGCA
ACCACGCTGG CCGAGGAACA CGCCCGCTGC CGCACGGTCG GCATGGATGG CTACGTGCTC
AAGCCCACCA CCTTGGCCAC CCTGCAGGAT GCCCTGTCCA GGCTGGGGAA CGCCGCAGTC
TCGCCCGATG CGGCCAAGGC CCCGGCAACC GCCCCGGACA ACGCGCTCGC GTTCCGCCTC
GACGACCTGC GCCAGACCTT GGGCGATGGC CCTGCTGCCG TCAGCCTGAT CCGCGTGTTC
ACCACCGCAC TGGGAGACGA CGCGAGGCAA CTGGGCGGGC TGCTCGCCAC GGCGGACCGC
CCCGCCCTGC GCAAATGGAC ACACCGGACC GGTGGTGCAC TGGCACTGCT GCACCACACC
GCCATCGATG CCGAGATGTC AGCGTTCCGG CACGCCGTGC ATAGCGCTGA TGACACTGGG
CTCCGGCAGG CCGGCGCCCG CATGCTGCAA CTGCTCGCGC ACCTGCAAGG CGTCATGCGG
CTGGCCGAAA CCCCCTCGCC GGGCACCGCC CCCACATGCC AATGA
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| Protein sequence | MATMLRRALP APAHLWRRGR TALLLCATAI ALLTTSDRAQ ADRTTRALPP MGHPLMPSAA
AQMASGTPAA AIALWTLAVL SMRHVQLRRE NRRRRRAEAD LARQLDFHHR LLESLPFPLA
AQDTQHRYVA VNAAFCHLFG QPREALLGRT PAHLGWRCAH TAARAQDIDR RATAASQGAC
EALTITAADG RERHVLYWVA PVHGPDGRPG GTVASLIDID GIRDAQAPAE QRAQRLHELT
ESLPALVCQF EMRPGTAARG RMRHLAGNAS ETLGAPAGKA RGRLPSPARL VHRDDRQRMR
GAALQSAAQL TLLDQQFRHG NGDGPVRWLH IRARPRRGAD GCTVWNGYLR DVTAERAQAD
ALVSARQAAE SALRAKDRFL ATMSHEIRTP MNGVLGLVEL LLQTRLEREQ QRMMTLVQES
SRALLHVLDD ILDYAKIEAD RLSITPAPTD LRALLDSTVG LLASRAHERS LAVRVDVDAA
VPATVSVDGM RLRQVLCNLL SNAIKFTEHG SVRLSAKCME TAADTVHLII RVTDTGIGIA
PEAQATLFTP FVQADSTITH RQCGTGLGLA ISRQLARLMG GSLDMDSTPN VGTTLTLRLE
VPVVDARYRL PRLASATVRV AVDDDTCRHG LEQFAVAAGL RVVHTGTADL TLVDSVRAPA
DAPRIVPVTG DAPYTGPGRS IPRPEALSTN PLNWQAFVQA CDTALARPAD GHAANGMPKS
RTVPEPAPAA ETPGMHILVA EDHPINRELI TRQLRLLGYR VTLAEDGAAA LQRLCETRFD
ALLTDCCMPR LDGFDLARQI RQREQQAPGG RRLPILAITA TTLAEEHARC RTVGMDGYVL
KPTTLATLQD ALSRLGNAAV SPDAAKAPAT APDNALAFRL DDLRQTLGDG PAAVSLIRVF
TTALGDDARQ LGGLLATADR PALRKWTHRT GGALALLHHT AIDAEMSAFR HAVHSADDTG
LRQAGARMLQ LLAHLQGVMR LAETPSPGTA PTCQ
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