| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3078 |
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| Symbol | |
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| ID | 1221941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3314560 |
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| End bp | 3315228 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239495 |
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| Product | response regulator transcription regulator protein |
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| Protein accession | NP_521199 |
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| Protein GI | 17547797 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0498276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGCCC CCGTCCGATT CGCGATCGCA GACGATCATC CCGGCGTGGT GGCCGCCGTG
CGGCATCTCG TCTGCCGCGT CGAGGGCTTC GAAGTGGTCG GCGAAGCCAC CAGCGCGGAT
GGACTGCTCG CCCTGCTGGG GCGCGTGCAC TGCGATGTGG TCATCACCGA CTACGCCATG
CCGGCCAGCC GCCACGGCGA CGGCATCGTC CTGCTCGAAT TCCTGCTGCG GCGCCATCCC
GGGGTGCGCG TCGTGGTGCT GACCATGCTG GAAACCCACG CGGTGGTGGA CCGCATGCTG
CGCGCCGGCA TTCGGGTCAT CGCCAGCAAG GCCGACAGCC CGCACCATAT CCTGGAGGGC
GTCCATGCCG CGCTGGCAGG CCGCGCCTAC CTGTCGCCAC GGTTCGGGCC CCGGCTGGAC
AGCGCCCACC CCGGACACGC CCCCGACGAC CACGGCGCGC TCGATCGGCT CGGCAAGCGC
GAACTCGAAG TCCTGCGCAT GTATGTCGGC GGCGAGACCG TCAGCGAGAT CGCCAGGCGG
CTCAACCGCA GCGTCAAAAC GATCAGCGCG CAGAAGCAGA AGAGCATGCG CAAGCTCAGG
CTGGCCACCG AGGCGGCGCT GTTCGACTTC GCCGCGCAGC ATGGCCTGCT CGGCACCACC
GGGCGCTGA
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| Protein sequence | MQAPVRFAIA DDHPGVVAAV RHLVCRVEGF EVVGEATSAD GLLALLGRVH CDVVITDYAM
PASRHGDGIV LLEFLLRRHP GVRVVVLTML ETHAVVDRML RAGIRVIASK ADSPHHILEG
VHAALAGRAY LSPRFGPRLD SAHPGHAPDD HGALDRLGKR ELEVLRMYVG GETVSEIARR
LNRSVKTISA QKQKSMRKLR LATEAALFDF AAQHGLLGTT GR
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