| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3068 |
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| Symbol | |
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| ID | 1221931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3305513 |
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| End bp | 3307783 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239485 |
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| Product | hypothetical protein |
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| Protein accession | NP_521189 |
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| Protein GI | 17547787 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.36924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTT TCCTCCTGCT GTTGATGCAG CGGCTGTCGC CGGCCGTGTT CCTGCTGTTG
TTTTGCATGT CGGGCGGTGC CGGCGCGGCG CCCGCCTCCT TTGCCAAGCT GGCCGGGCTG
CCGTCGGCCA CCGGCAGCGC TTCGAGCCCC GTGGCCACGC CCGAGCAGAC GCGCGCCTCG
CTCGACGCCG TCATTACGTT GCTCGACAGC GACCAGCAGC GCACCGCGCT CCTCGGCCAA
CTCAAGCAAT TGCGCGACGG CATGGCCGCG CAGCAGACCG CCCAGGCCCA GCAGGCGCCC
GGGTTGCTGG GGGCGGTTGC CTCGCTGATC GAAAACGGCT CGCTGCAGGC CGATGCCGAG
GCTGGCGCGC CGCGCTACTG GCTGCACCGC GTCGAAGCCG CCGACGACAA CCTCAGCCTG
CTCGCCGCCC CCGAGCGGCG CCTGCGCGTG CTGGCCGATT TCGCCGGCAC CGTCGCCGTC
TGGGCGGCCA TCGCCGGCGG GCTGCTGGGG CTGGGCTGGG GCATCCGCCG CGTGTTCGGG
CTGAAGGCGG GCCTCGGGCC GCATCCGACC ACGCGCGCGC TGTTCGTCGA TGCGCTGCGC
AAGATCGGTC CGTGGGCGGC ATCGTTCGCG GTGCTGATGC GCCTGGAGCA CGAGGCGACA
CCGGGCTTCG TGCTCGCGCT GGTGTTGGCC TACGCCATCG TGTGGGGGGC GATCGTGACG
GCCGCCGTGG CGATGCTGTT CTCGCTGTTC GCCGGCAGCG CGCACCGGCG CGTGGCGGTG
GAGCTCCTGC TCCGGCGCGG CATGTGGCCG ATCTTTGTGG CGGCCAGCCT GGGCGCGTGC
GGCGATGCGC TGGTCGATCC GCGGGTTGCG CTGGTGCTCG GCGGCGCGCT GAGCCTGCTG
CTGGCGACGG TCTGCAATGC CGCTTCGTCG CTGATGCTGG CGGCGGGCGC GCTGTGGCTG
CGCCGCCCGA TCGGCCAGCT GATCGCCAAC CGTTCGTTCG AGCAGCGCAA CGGTCAGCAT
ACGGGCAACC AGTTCCGCCG CGCGGTCGCG GTGCTCTGGC CGGTGCCGGT GGTGGTGCTG
GCCGGCGCCA CCGTGCTGGC GACGCTGGCC CTGCCGGACA ACGTCGACGT GGTGTCGCGG
CGCGCGGTGA TGACCTCGCT GCTGCTGGCG GCGGCCTTCC TGCTGTCGGC TGTGGTGCGG
CCGCGCGCGC ACTGGCACCT GCACGTGCGG TTCGGGCGCA CGTCGCCGTA TCTCGAGCGG
CTCAAGCATT TCTTCTCGGC GCTGGTGCAG CTGGCCATCT GGGTGGCGTT TCTCGAGCTG
GTGACGCGGG TGTGGGGCCA CACGCTGGCG GAGCTGCTGC GCAGTTCGGT CAACGGCCGC
CGTATCGCCG ATGCGCTGGT CGGGCTGATC GGCACGGTGT TCTCCACCTG GCTGGCGTGG
ATCCTGCTCG ATACCGCCAT TCTGCAGGCG CTGTCGCCCG CCGGCGGACG CGCGCGCCTG
CAGCCGAGCA CGCGGGCGCG CACCATCCTG CCGCTGTTGC GCAACGGCCT GAAGGTGACG
CTGGTGGTGA CTGCCGGCAT CGGCGTGCTG GCCAACCTGG GCGTGAACGT GACGCCGTTG
GTGGCCGGCG CCGGGGTGAT CGGCCTGGCG GTGGGGTTCG GCGCGCAGTC GCTGGCGCAG
GATCTGATCA CCGGCATCTT CATCCTGATG GAAGACACCA TCAGCGTGGG CGATACGGTG
GACGTGGGCG TGGCCACCGG CACCGTCATC AGCCTGACCA TCCGCACCGT GCGGCTGCGC
GACGGCGTTG GGGCTATCCA CTCGATTCCG TTCAGCCAGA TCAAGACCGT GCGCAACCTG
TCGCGCGATT ACTCGTTCGC CGATTTCGAA GTGCGCGTGG CGATGGACGC CGACCCCAGG
CAGGCCATCG ACCTGGTGCG CGAGGCCGCT GCCCGCACCG CCGGGGATGT CCGCTTCGAG
CGCATCCTGA TCGGCGTGCC CGAGGTGTTC GGGCTGGATC GCTTCGAGGG CGGCGCGATG
ATCGTCAAGG GGCGCTTCAA GACGCGGCCG CAGAAGCAGG CCGATGTGCT GCGCGCCTTC
AACGTGGTGC TCAAGGAGGG GTTCGATGCG GCCGGCGTGC CGCTGGCGAT GCCGGGCACG
GTGCTGCGTC CGTCGCCCGC GCTGGAGCAG TGGATGGCAC GCGCGGGCGC CCTGCCGGGC
GATGCCGACC CTGCGCCGGT GCCGCAGTCG CCGCCCGCCG CGCCGGCCTG A
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| Protein sequence | MRTFLLLLMQ RLSPAVFLLL FCMSGGAGAA PASFAKLAGL PSATGSASSP VATPEQTRAS
LDAVITLLDS DQQRTALLGQ LKQLRDGMAA QQTAQAQQAP GLLGAVASLI ENGSLQADAE
AGAPRYWLHR VEAADDNLSL LAAPERRLRV LADFAGTVAV WAAIAGGLLG LGWGIRRVFG
LKAGLGPHPT TRALFVDALR KIGPWAASFA VLMRLEHEAT PGFVLALVLA YAIVWGAIVT
AAVAMLFSLF AGSAHRRVAV ELLLRRGMWP IFVAASLGAC GDALVDPRVA LVLGGALSLL
LATVCNAASS LMLAAGALWL RRPIGQLIAN RSFEQRNGQH TGNQFRRAVA VLWPVPVVVL
AGATVLATLA LPDNVDVVSR RAVMTSLLLA AAFLLSAVVR PRAHWHLHVR FGRTSPYLER
LKHFFSALVQ LAIWVAFLEL VTRVWGHTLA ELLRSSVNGR RIADALVGLI GTVFSTWLAW
ILLDTAILQA LSPAGGRARL QPSTRARTIL PLLRNGLKVT LVVTAGIGVL ANLGVNVTPL
VAGAGVIGLA VGFGAQSLAQ DLITGIFILM EDTISVGDTV DVGVATGTVI SLTIRTVRLR
DGVGAIHSIP FSQIKTVRNL SRDYSFADFE VRVAMDADPR QAIDLVREAA ARTAGDVRFE
RILIGVPEVF GLDRFEGGAM IVKGRFKTRP QKQADVLRAF NVVLKEGFDA AGVPLAMPGT
VLRPSPALEQ WMARAGALPG DADPAPVPQS PPAAPA
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