| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3061 |
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| Symbol | |
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| ID | 1221924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3299209 |
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| End bp | 3300375 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239478 |
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| Product | substrate-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_521182 |
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| Protein GI | 17547780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.664691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.158134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGG GAAATCACAC GCGCAGTCGG CGGGGTACTC GGCTGCGCCG GCTGGCGGCC
GTCGCGTTTG CGCTTTGCGC CGGGCTGGCG GCATCGGTCG CCCAGGCCGA CATCAGCGTC
ATCCAGTCAT TGCCGCTGTC CGGCTCGCAG GCCGTCACCG GGCACGCGCT GAATGCCGGC
GCCCGGCTGT ACTTCGACTG GCTCAACCTG AACGGCGGCA TCCACGGCGA GACCGTCCGC
CTGGTCGCCC GCGACGACGA GCAGAAGGTC GAGCAGACCG TGCGCAACGT GCGCGACATG
GCCAAGGTCG ACAACCCGGT CGCGCTGCTC ACCGTGGTCG GCACCGCCAA CGTCGAGGCG
CTGATGCGCG AGGGCGTGCT GGCCGAGGCC CGGCTGCCGC TGGTCGGGCC GGCCACCGGC
GCGTCCAGCA TGACCGGCGA CCCGCTGGTG TTCCCCATCA AGGCGAGCTA CCGGCAGGAG
ATCGACAAGA TGATCACCGC GCTGGTGACG ATCGGCATCA CGCGCATCGG CGTGCTGTAC
CAGGACGATG CGCTGGGCAA GGAGGCCATC GCCGGCGTCG AGCGCACGCT CAAAGCGCAC
GGGCTGCCGA TTGCCGCCAT GGCCTCGTAT CCGCGCAACA CCGCGAGCGT GGGCCCGGCA
GTGGACAAGC TGCTGGCCGC CGACGTGCAG GCGATTTTCC TGGGCGCCAC CGCCGCGCCG
GCGGGCCAGT TCGTCCGGCA GTACCGGGAG CGGGGTGGTG GGGCGCAGTT GCTCGGGCTG
TCGTCCATCG ATCCGGGCAT CCTGCAGAAG ATCGCCGGGC TCGATGCGGT GCGCGGTTAT
TCGCTGGCGC TGGTGATGCC GAACCCGGGC AAGAGCGTGC ACCCGGTGAT CCGCGAGTTC
AACCGGGCCC GCGCGGCGGT GGGCGCGACG GACGTCGAGC TGTCGTTCCG GGCGGTGGAG
GGATTCGTGG CGGCCAAGGT GCTGGCCGAG GCGATCCGCC GCGCGGGCCC GAAGCCGACC
CGCGAGCAGG TGCAGCATGC GCTGGCGGGG CTGCACGACT ACGACGTCGG CGGCGGGTTC
ACGGTGGATT TCACCGATCG CAGCCGCCCC GGTTCGCACT ATGTCGAGCT GGGCGTGGTG
GGGCCGAACG GCCTGGTGAT CCAGTAG
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| Protein sequence | MQMGNHTRSR RGTRLRRLAA VAFALCAGLA ASVAQADISV IQSLPLSGSQ AVTGHALNAG
ARLYFDWLNL NGGIHGETVR LVARDDEQKV EQTVRNVRDM AKVDNPVALL TVVGTANVEA
LMREGVLAEA RLPLVGPATG ASSMTGDPLV FPIKASYRQE IDKMITALVT IGITRIGVLY
QDDALGKEAI AGVERTLKAH GLPIAAMASY PRNTASVGPA VDKLLAADVQ AIFLGATAAP
AGQFVRQYRE RGGGAQLLGL SSIDPGILQK IAGLDAVRGY SLALVMPNPG KSVHPVIREF
NRARAAVGAT DVELSFRAVE GFVAAKVLAE AIRRAGPKPT REQVQHALAG LHDYDVGGGF
TVDFTDRSRP GSHYVELGVV GPNGLVIQ
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