| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3052 |
|---|
| Symbol | glpK |
|---|
| ID | 1221915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 3289517 |
|---|
| End bp | 3291013 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637239469 |
|---|
| Product | ATP:glycerol 3-phosphotransferase protein |
|---|
| Protein accession | NP_521173 |
|---|
| Protein GI | 17547771 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.155292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACC TCCTCGCGCT CGACCAGGGC ACGTCCAGTT CGCGTGCCAT CGTGTTCAAC
CGCGCCGGCC AGATCGTCGC CAGCGCCCAG CAGGAGTTTC CGCAGCATTT TCCGCAGCCC
GGCTGGGTCG AGCACGATCC GCTCGACATC TGGAGCAGCC AGCTCGCCAC CTGCCGCGCC
GCGCTCGAAC AAGCCAGGCT GGGCGCCGCC GACATGGCCG CGCTCGGCAT CACCAACCAG
CGCGAGACCA CCGTGGTGTG GGAACGCGCC ACCGGCCGCC CCATCTTCAA TGCCATCGTC
TGGCAGGACC GCCGCACCGA GGCGATCTGC GAGCGGCTGC GCGCCGAGGG CCTGGAGGAC
GAGGTGCGCA AGCGCACCGG GCTGGTGATC GATCCGTATT TCTCGGGCAC CAAGCTGCGC
TGGATCCTCG ACCACGTGGA CGGTGCCCGC GAACGCGCCG CGCGCGGCGA GCTCGCCTTC
GGCACCATCG ACAGCTGGCT GGTGTGGCAA CTCACGCGCG GCCGCCTGCA CGTGACCGAC
GTATCCAACG CCTCGCGCAC CCTGCTGTGG AACATCCACA CCGGCCAGTG GGATGCCGAC
CTGATGCGCG CGCTCGACAT CCACCCGAGC CTGCTGCCGG AGGTGCACCC GTCGGCCCAT
CGCTTCGGGC AGACCGATGC CGACTGGCTG GGCGCGCCGC TCACCATCGG CGGCATCGCC
GGCGACCAGC AGTCGGCGCT GTTCGGCCAG GCCTGCTTCA AGCCTGGCAT GGCCAAGAAC
ACCTACGGCA CCGGCTGCTT CATGCTGCTC AACACCGGCG AGCGCGCGGT CGAATCGCGC
AATGGGCTGA TCAGCACGGC GGCCTGCCAG AGCGGCAGCC GGCGCAGCTA CGCGCTGGAA
GGCAGCGTGT TCGTCGGCGG CGCGGTGGTG CAGTGGCTGC GCGACGGGCT GCGCGCGATC
CAGCGCTCGG CCGACGTGGA GGGGCTCGCC GCCTCGGTGC CGGATTCGGG CGGCGTGGTG
TTCGTGCCCT CGTTCACCGG ACTGGGGGCG CCGTACTGGG ACCCGACCGC GCAGGGCGCG
ATCGTCGGGC TGTCGCGCGG CACGACCATC GGCCATATCG CGCGGGCGGC GCTGGAGTCG
ATCGCGTTCC AGAGCACCGC GCTGCTGCAG GCGATGACGC GCGACGCGGT CTCGGCCATC
ACGGAGCTGC GCGTGGACGG CGGCGCCTCA GCCAACAACC TGCTGCTGCA GTTCCAGGCC
GACCTGCTCG GCATCCCGGT GGTGCGCCCG GAGATCATCG AAACCACGGC GCTGGGCGCG
GCCTACCTGG CCGGCATCGC CACCGGCTTC TACCGGAGCG AGGACGAGGT CGCCCGGCAA
TGGCGCGCCT CGCGCACGTT CCACCCGGTC ATCAGCCGCG ACGAAGCGCA GCACCGCATG
GCGCAATGGG AGATGGCGGT GGCGCAGGTG CGGCTGCCGA CCACGCACGG CCACTGA
|
|---|
| Protein sequence | MEYLLALDQG TSSSRAIVFN RAGQIVASAQ QEFPQHFPQP GWVEHDPLDI WSSQLATCRA
ALEQARLGAA DMAALGITNQ RETTVVWERA TGRPIFNAIV WQDRRTEAIC ERLRAEGLED
EVRKRTGLVI DPYFSGTKLR WILDHVDGAR ERAARGELAF GTIDSWLVWQ LTRGRLHVTD
VSNASRTLLW NIHTGQWDAD LMRALDIHPS LLPEVHPSAH RFGQTDADWL GAPLTIGGIA
GDQQSALFGQ ACFKPGMAKN TYGTGCFMLL NTGERAVESR NGLISTAACQ SGSRRSYALE
GSVFVGGAVV QWLRDGLRAI QRSADVEGLA ASVPDSGGVV FVPSFTGLGA PYWDPTAQGA
IVGLSRGTTI GHIARAALES IAFQSTALLQ AMTRDAVSAI TELRVDGGAS ANNLLLQFQA
DLLGIPVVRP EIIETTALGA AYLAGIATGF YRSEDEVARQ WRASRTFHPV ISRDEAQHRM
AQWEMAVAQV RLPTTHGH
|
|---|
| |