Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3049 |
Symbol | |
ID | 1221912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3286322 |
End bp | 3287152 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637239466 |
Product | transmembrane ABC transporter protein |
Protein accession | NP_521170 |
Protein GI | 17547768 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0698875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGA ACAACAACAA CGAGCACAAG CGCAAGATCG CCCGCGCCAT CACGCTGGTG GTGTACGTGG CATTCGCGGT GCTGCCGCTG TACTGGATGC TGAGCATGTC GCTCAAGACC AACGAGGAGA CGCTGGCCGG CTTCTCGCTG TGGCCCAGGC TGATGACCTT CGACAACTAC AAGGTCATCT TCACCGACCC GTCGTGGTAC TGGGGCTACA TCAACTCGAT CCTCTACGTG ACCATGAACA CGGTGCTGTC GACCGTGGTG GCGCTGCCGG CGGCCTATGC CTTCTCGCGC TACCGCTTCC TGGGCGACAA GCACATGTTC TTCTGGCTGC TGACCAACCG GATGACGCCG CCGGCGGTGT TCCTGCTGCC GTTCTTCCAG CTGTATTCGA CGGTCGGCCT GATGGACACC CACCTGGGCG TGGCGCTGGC GCACATGCTG TTCAACGTGC CGCTGGCGGT GTGGATCCTG GAAGGCTTCA TGTCAGGCAT CCCGCGCGAG ATCGACGAGA CGGCGTACAT CGACGGCTAC AGCTTCCCGG CCTTCTTCCT GAAGATCTTC CTGCCGCTGA TCAAGGCGGG CGTGGGCGTG ACGGCGTTCT TCTGCTTCAT GTTCAGCTGG GTGGAGCTGT TGCTGGCGCG CACCCTCACC TCGGTCGACG CCAAGCCGAT CACGGCGGTG ATGACGCGCA CGGTGTCGGC CTCGGGCATG GACTGGGGCG TGCTGGCCGC GGCCGGCGTG CTGACCATCA TCCCCGGCGC GCTGGTGATC TGGTTTGTGC GGAACTACAT CGCGAAGGGC TTCGCGATGG GCCGCGTCTA G
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Protein sequence | MRKNNNNEHK RKIARAITLV VYVAFAVLPL YWMLSMSLKT NEETLAGFSL WPRLMTFDNY KVIFTDPSWY WGYINSILYV TMNTVLSTVV ALPAAYAFSR YRFLGDKHMF FWLLTNRMTP PAVFLLPFFQ LYSTVGLMDT HLGVALAHML FNVPLAVWIL EGFMSGIPRE IDETAYIDGY SFPAFFLKIF LPLIKAGVGV TAFFCFMFSW VELLLARTLT SVDAKPITAV MTRTVSASGM DWGVLAAAGV LTIIPGALVI WFVRNYIAKG FAMGRV
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