Gene RSc3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3041 
Symboltuf 
ID1221896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3271859 
End bp3273049 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID637239450 
Productelongation factor Tu 
Protein accessionNP_521162 
Protein GI17547760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0080343 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.096278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG AAAAGTTCGA GCGGACCAAG CCGCACGTGA ACGTTGGGAC GATCGGTCAC 
GTTGACCACG GCAAGACGAC GCTGACGGCA GCAATCGCGA CGGTGCTGTC GAGCAAGTTC
GGTGGCGAAG CGAAGAAGTA CGACGAAATC GACGCAGCAC CGGAAGAAAA GGCACGCGGC
ATCACGATCA ACACCGCGCA CATCGAGTAC GAAACGGCCA ACCGCCACTA CGCACACGTC
GACTGCCCGG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGTGCCGC CCAGATGGAC
GGCGCCATCC TGGTGTGCTC GGCCGCTGAC GGCCCGATGC CGCAAACGCG TGAGCACATC
CTGCTGGCCC GCCAGGTCGG CGTGCCGTAC ATCATCGTCT TCCTGAACAA GTGCGACATG
GTGGACGACG CTGAGCTGCT GGAACTGGTC GAAATGGAAG TGCGCGAGCT GCTCTCCAAG
TACGACTTCC CGGGCGACGA CACCCCGATC ATCAAGGGTT CGGCCAAGCT GGCGCTGGAA
GGCGACAAGG GCGAGCTGGG CGAAGTGGCC ATCATGAACC TGGCCGACGC ACTGGACTCG
TACATCCCGA CGCCGGAGCG CGCTGTTGAC GGCACGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CGGGTCGCGG CACCGTGGTG ACCGGCCGTA TCGAGCGCGG CATCATCAAG
GTCGGCGAAG AAATCGAAAT CGTCGGCATC AAGGCCACGC AGAAGACCAC CTGCACCGGC
GTGGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAGGCTG GCGACAACGT CGGTATCCTG
CTGCGCGGCA CCAAGCGCGA AGACGTCGAG CGCGGCCAAG TGCTGTGCAA GCCGGGTTCG
ATCAAGCCGC ACACGCACTT CACCGGCGAG GTCTACATCC TGTCGAAGGA CGAAGGTGGT
CGTCACACCC CGTTCTTCAA CAACTATCGC CCGCAGTTCT ATTTCCGCAC GACCGACGTG
ACCGGCTCGA TCGAGCTGCC GAAGGACAAG GAAATGGTCA TGCCCGGCGA CAACGTGTCG
ATCACCGTCA AGCTGATCGC CCCGATCGCC ATGGAAGAAG GCCTGCGCTT CGCCATCCGT
GAAGGCGGTC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
 
Protein sequence
MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLSSKF GGEAKKYDEI DAAPEEKARG 
ITINTAHIEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YDFPGDDTPI IKGSAKLALE
GDKGELGEVA IMNLADALDS YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGIIK
VGEEIEIVGI KATQKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVE RGQVLCKPGS
IKPHTHFTGE VYILSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPKDK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE