| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3037 |
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| Symbol | rplA |
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| ID | 1221891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3269361 |
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| End bp | 3270056 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239445 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | NP_521158 |
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| Protein GI | 17547756 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0489009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TTTCGAAGCG CGTGGCCGCG AATAAGGCCA AGGTCGAGCG CACCAAGTTC
TACCCGATCG ACGAGGCTCT GAGCCTGGTC AAGGAATGCG CCAGCGCCAA GTTCGATGAG
TCCATCGACG TGGCCGTGCA ACTGGGTATC GATGCGAAGA AGTCGGACCA AGTGGTTCGC
GGTTCGGTGG TGCTGCCCGC CGGTACCGGC AAGTCGGTGC GCGTGGCCGT GTTCGCCCAG
GGCGAAAAGG CCGAGCAAGC CAAGGCTGCC GGCGCCGAGA TCGTCGGCAT GGAAGACCTG
GCCGAGCAGA TCAAGGCCGG CAACATGGAC TTCGACGTCG TGATCGCTTC GCCGGACACG
ATGCGCGTGG TCGGTACGCT GGGTCAGATT CTGGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGCA CCGTGACGCC GGACGTCGCC ACGGCCGTGA AGAACGCCAA GGCGGGTCAG
GTGCAGTTCC GCGTCGACAA GGCCGGGATC ATCCACGCCA CGATCGGCCG TCGCTCGTTC
GAGCCGGCTG CGCTGAAGAG CAACCTGGCT GCGCTGCTGG ACGCCCTGAG CAAGGCCAAG
CCGGCATCGA GCAAGGGCGT GTACCTGCGC AAGATCGCCG TGTCGTCGAC GATGGGCGTG
GGTGTGCGTA TCGACCAGGC GACGCTGAGC GCCTGA
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| Protein sequence | MAKISKRVAA NKAKVERTKF YPIDEALSLV KECASAKFDE SIDVAVQLGI DAKKSDQVVR
GSVVLPAGTG KSVRVAVFAQ GEKAEQAKAA GAEIVGMEDL AEQIKAGNMD FDVVIASPDT
MRVVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRRSF
EPAALKSNLA ALLDALSKAK PASSKGVYLR KIAVSSTMGV GVRIDQATLS A
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