Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3031 |
Symbol | |
ID | 1221885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3256364 |
End bp | 3257089 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637239439 |
Product | hypothetical protein |
Protein accession | NP_521152 |
Protein GI | 17547750 |
COG category | [S] Function unknown |
COG ID | [COG3234] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0310566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0597256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGC GCGCGCTGGC GCATGTCCCG GCGGCCGCGC CGCGCCGCCG CTGGCTGGCC GCGGCCGGTG CCGGCCTGCT CGCGCAGGCC TTCGCGCCGG GCGTGCGGGC GCTGTCCGGC TGGGCCGACG CGGCAGCGGC GGGGCCCGGC GCGCTGACGC CCGAGCAGTC GGGGGTGTTC CGCGCGTGGT TCGTGCGCAT CGTCAACGAG CAGCTGCGGC AGGGGCCCAC GCCGCGCTGG ACGCATCGCG ACTGCGCCGG CCTGGTGCGC TTTGCCGCCG CCGAGGCGCT GCGTCCGCAC GATGTCCGCT GGCTGCGCGC CAACGGCATG CGCGACGCCG AGTCGGCGCG CCAGCTGCCG CCGGAGCTCG ACCTGACCCC GGCCCAGCGC ACGCTCGCGC AGCGCTGGGC ACGCATCGAC GGCAGCACCG GCGCCTACGT CTCCGCACTG GCGCTGATCC AGCAGAACAG CCGCTTCATC GCCAAGGATG TCAACCAGGC ACTGCCCGGC GACCTGCTGT TCTTCGATCA GGGCGACGAC CAGCATCTGA TGATCTGGAT GGATCGCTAC ATCGCTTACC ACACCGGCAC CGTCACCCGC ACCGACGCGG GTTTGCGGGC GGTTCCGGTT TCTGAACTGA TGCAATGGAA AGACTCGCGC TGGCAGCCGC AGGGCGGCAA TCCCAACTTC ATCGGCGTGT TTCGCCTGGC CTTTTTGACG CGATAG
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Protein sequence | MKPRALAHVP AAAPRRRWLA AAGAGLLAQA FAPGVRALSG WADAAAAGPG ALTPEQSGVF RAWFVRIVNE QLRQGPTPRW THRDCAGLVR FAAAEALRPH DVRWLRANGM RDAESARQLP PELDLTPAQR TLAQRWARID GSTGAYVSAL ALIQQNSRFI AKDVNQALPG DLLFFDQGDD QHLMIWMDRY IAYHTGTVTR TDAGLRAVPV SELMQWKDSR WQPQGGNPNF IGVFRLAFLT R
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