| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3022 |
|---|
| Symbol | fusA1 |
|---|
| ID | 1221876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3241833 |
|---|
| End bp | 3243944 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637239430 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | NP_521143 |
|---|
| Protein GI | 17547741 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000530326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00189636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCGTA AGACCCCCAT TGAGCGCTAC CGTAACATCG GTATTTCCGC TCACATCGAC
GCCGGCAAGA CCACCACGAC CGAGCGGATC CTGTTCTACA CCGGTGTGAA CCACAAGATC
GGTGAAGTGC ATGATGGCGC TGCCACCATG GACTGGATGG AGCAGGAGCA AGAGCGCGGC
ATCACCATCA CGTCCGCTGC TACCACCGCC TTCTGGAAGG GCATGGGCGG CAACTACCCC
GAGCACCGCT TCAACATCAT CGACACCCCG GGCCACGTGG ACTTCACCAT CGAGGTGGAG
CGTTCCATGC GTGTGCTGGA CGGCGCGTGC ATGGTGTACT GCGCCGTGGG TGGCGTGCAG
CCGCAGTCGG AAACCGTCTG GCGTCAGGCC AACAAGTACG GCGTGCCGCG TCTGGCATTC
GTCAACAAGA TGGACCGTAC CGGCGCGAAC TTCTTCAAGG TCTACGATCA GCTGAAGACC
CGCCTGAAGG CCAACCCGGT GCCCGTGGTG GTGCCGATCG GCGCTGAAGA CGGCTTCCAG
GGCGTCGTCG ATCTGCTCGA GATGAAGGCG ATCATTTGGG ACGAGGCTAG CCAGGGCGTC
AAGTTCGAAT ACAAGGACAT CCCGGCCGAG CTGCAAGCCA CCGCTGAAGA ATGGCGCGAG
AAGATGGTCG AGTCCGCCGC CGAAGCCAGC GAAGCGCTGA TGGAAAAGTA CCTGGGCGGC
GAAGAGCTGA CCCGCGCCGA GATCGTCAAG GCGCTGCGTG ACCGTACCAT CGCCTGCGAA
ATCCAGCCGA TGCTGTGCGG CACCGCGTTC AAGAACAAGG GCGTGCAGCG TATGCTCGAC
GCCGTGATCG ACTTCCTGCC GTCGCCGGTC GACATTCCGC CGGTCAAGGG CGTCGACGAG
AACGACGACG AGAAGAAGCT CGAGCGCAAG GCCGACGACA ACGAGAAGTT CTCGGCGCTG
GCGTTCAAGA TCATGACCGA CCCGTTCGTT GGCCAGCTGA TCTTCTTCCG CGTCTACTCG
GGCAAGATCA ATTCGGGCGA CACCGTGTAC AACCCGGTCA AGCAGAAGAA GGAGCGTCTG
GGCCGTATTC TGCAGATGCA CGCCAACCAG CGCGAAGAAA TCAAGGAAGT GCTGGCCGGC
GACATCGCCG CAGCGGTGGG CCTGAAGGAC GCCACCACGG GCGATACGCT GTGCGACCCG
ACCGCCCCGA TCGTGCTCGA GCGCATGGTG TTCCCGGAGC CGGTGATCTC GCAGGCCGTC
GAGCCGAAGA CCAAGGCCGA CCAGGAAAAG ATGGGCATCG CCCTGAACCG CCTGGCCGCA
GAAGATCCGT CGTTCCGCGT GCGTACCGAT GAAGAATCGG GCCAGACTAT CATTTCGGGC
ATGGGTGAGC TCCACCTCGA AATTCTGGTC GACCGCATGA AGCGCGAATT CGGCGTGGAA
GCCAACATTG GCGCTCCGCA GGTGGCTTAC CGCGAAACCA TTCGCAAAAA GGCCGAAGAC
GTCGAAGGCA AGTTCGTCAA GCAGTCGGGC GGCCGCGGCC AGTACGGTCA CGCTGTGATT
ACGCTGGAAC CGCAAGAGCC GGGCAAGGGC TTCGAGTTCG TCGACGCCAT CAAGGGCGGT
GTGATTCCTC GCGAATACAT CCCGGCGGTG GAAAAGGGTA TCGTCGACAC GCTGCCCTCG
GGCATCCTGG CCGGCTTCCC GGTGGTGGAC GTGAAGGTCA CGCTGACGTT TGGTTCGTAC
CACGACGTGG ACTCGAACGA AAACGCGTTC CGCATGGCTG GTTCGATGGC GTTCAAGGAC
GCCATGCGCA AGGCCAGCCC GGTTCTGCTT GAGCCGATGA TGGCTGTGGA AGTGGAAACG
CCGGAAGACT ACACCGGTAC CGTGATGGGC GATCTGTCGT CCCGCCGCGG CATCGTGCAG
GGCATGGACG ACATGGTGGG CGGCGGCAAG ATCATCAAGG CCGAAGTCCC GCTGTCGGAA
ATGTTCGGCT ACTCCACGTC GCTGCGCTCG GCCACGCAAG GCCGCGCCAC GTACACCATG
GAGTTCAAGC ACTACTCCGA GGCACCGAAG AACATCGCCG AAGCTGTGAT GGCCGCCAAG
GGCACGAAGT AA
|
|---|
| Protein sequence | MARKTPIERY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG
ITITSAATTA FWKGMGGNYP EHRFNIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ
PQSETVWRQA NKYGVPRLAF VNKMDRTGAN FFKVYDQLKT RLKANPVPVV VPIGAEDGFQ
GVVDLLEMKA IIWDEASQGV KFEYKDIPAE LQATAEEWRE KMVESAAEAS EALMEKYLGG
EELTRAEIVK ALRDRTIACE IQPMLCGTAF KNKGVQRMLD AVIDFLPSPV DIPPVKGVDE
NDDEKKLERK ADDNEKFSAL AFKIMTDPFV GQLIFFRVYS GKINSGDTVY NPVKQKKERL
GRILQMHANQ REEIKEVLAG DIAAAVGLKD ATTGDTLCDP TAPIVLERMV FPEPVISQAV
EPKTKADQEK MGIALNRLAA EDPSFRVRTD EESGQTIISG MGELHLEILV DRMKREFGVE
ANIGAPQVAY RETIRKKAED VEGKFVKQSG GRGQYGHAVI TLEPQEPGKG FEFVDAIKGG
VIPREYIPAV EKGIVDTLPS GILAGFPVVD VKVTLTFGSY HDVDSNENAF RMAGSMAFKD
AMRKASPVLL EPMMAVEVET PEDYTGTVMG DLSSRRGIVQ GMDDMVGGGK IIKAEVPLSE
MFGYSTSLRS ATQGRATYTM EFKHYSEAPK NIAEAVMAAK GTK
|
|---|
| |