Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3016 |
Symbol | rplB |
ID | 1221870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3237414 |
End bp | 3238244 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239424 |
Product | 50S ribosomal protein L2 |
Protein accession | NP_521137 |
Protein GI | 17547735 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000236322 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00250234 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCACTCG TCAAGACCAA GCCGACATCG CCGGGCCGCC GCTCGATGGT GAAGGTCGTC AATCCCGACC TTCACAAGGG CGCACCGCAC GCGCCGCTGC TGGAAAAGCA ATTCCAGAAG TCCGGCCGTA ACAACAACGG CCACATCACC ACCCGTCACA AGGGCGGTGG TCACAAGCAT CACTACCGCA TCGTCGACTT CAAGCGTAAC GACAAGGACG GCATCCCGGC CAAGATCGAA CGCCTGGAAT ACGATCCGAA CCGCAGCGCC AACATCGCGC TCGTGCTGTT CGCCGATGGC GAGCGCCGCT ACATCATCGC CCCGAAGGGC GCGGTGGTCG GCCAAGCCGT GGCCAACGGC CCGGAAGCGC CGATCAAGGC CGGTAACAAC CTGCCGATCC GCAACATCCC GGTCGGTACG ACGATTCACT GCGTCGAGAT CCTGCCGGGC AAGGGCGCGC AAATCGCCCG TTCGGCTGGC ACCTCCGCCG TGCTGCTGGC TCGCGAAGGC ATCTACGCTC AAGTGCGCCT GCGCTCGGGT GAAGTCCGCC GCGTGCACAT CGAGTGCCGC GCGACCATCG GTGAAGTCGG CAACGAAGAG CACAGCCTGC GCCAAATCGG CAAGGCCGGT GCAACCCGTT GGCGTGGTAT TCGCCCGACC GTTCGCGGCG TGGCGATGAA CCCGGTGGAT CACCCGCACG GTGGTGGTGA AGGCAAGACC GCTGCCGGTC GCGATCCGGT GTCGCCGTGG GGTACCCCGA CCAAGGGTTA CCGCACCCGT AGTAACAAGC GCACGACCAG CATGATCGTG CAACGCCGTC ACAAGCGTTA A
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Protein sequence | MALVKTKPTS PGRRSMVKVV NPDLHKGAPH APLLEKQFQK SGRNNNGHIT TRHKGGGHKH HYRIVDFKRN DKDGIPAKIE RLEYDPNRSA NIALVLFADG ERRYIIAPKG AVVGQAVANG PEAPIKAGNN LPIRNIPVGT TIHCVEILPG KGAQIARSAG TSAVLLAREG IYAQVRLRSG EVRRVHIECR ATIGEVGNEE HSLRQIGKAG ATRWRGIRPT VRGVAMNPVD HPHGGGEGKT AAGRDPVSPW GTPTKGYRTR SNKRTTSMIV QRRHKR
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