| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2999 |
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| Symbol | secY |
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| ID | 1221853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3229331 |
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| End bp | 3230677 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637239407 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | NP_521120 |
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| Protein GI | 17547718 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0377089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.071315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCACGG CGAAACCTAA TGTGATGGCG CAGGCCAAGA ACACGGCCAA GTACGGCGAT
CTTCGCCGTC GGCTGGTGTT CTTGGTCCTG GCACTGCTGG TGTACCGGAT CGGCGCGCAC
ATCCCTGTGC CTGGCATCGA TCCGGACCAA CTGGCGCAGC TTTTCCAACG GCAGTCGGGT
GGCATCCTCG GGATGTTCAA CCTGTTCTCC GGCGGCGCGC TCTCGCGCTT CACGGTATTT
GCGCTGGGGA TCATGCCGTA TATCTCGGCA TCGATCATCA TGCAGCTGCT GACGATCGTG
TTGCCGCAGC TGGAGTCGCT GAAGAAGGAA GGGCAGGCTG GCCAGCGCAA GATTACGCAA
TACACGCGCT ACGGTACGGT CGTCCTGGCG ACTTTCCAGG CGCTGGGCAT CGCGGTGGCG
CTTGAGGCGC AGCCTGGTCT GGTGCTGGAC CCGGGCCTGA TGTTCCGGGC GACGGCCGTG
ATCACGCTGG TGACGGGCAC GATGTTCCTG ATGTGGCTGG GTGAGCAGAT CACCGAGCGC
GGTCTGGGCA ACGGCATCTC GATCATCATC TTTGGCGGGA TCGCAGCAGG GTTGCCCAAC
GCCATCGGCG GGCTGTTCGA ACTGGTGCGC ACGGGGTCGA TGGGAATTTT CTCCGCGATT
CTGGTAGTGG CGATCATTGG CGCGGTGACG TTCCTGGTGG TGTTCATCGA ACGCGGCCAG
CGCAAGATCC TCGTCAACTA TGCCAAGCGG CAGGTCGGTA ACAAGATCTA TGGCGGTCAG
TCGTCGCATC TGCCGCTGAA GTTGAACATG GCTGGGGTGA TTCCGCCGAT CTTCGCATCG
TCGATCATTC TGTTCCCGGC CACGATCGCG GGCTGGTTCA CTGCCGGCAA CTCGACGAAT
CCGGTTGCAC GGTTCGTCAA GGATCTGGCG TCGACGCTGT CGCCGGGCCA GCCGGTGTAC
ATCCTGCTGT ATGCGGCGGC AATCATCTTC TTCTGCTTCT TCTACACCGC GCTGGTCTAT
AACAGCCGCG AAGTGGCGGA TAACCTGAAG AAGAGTGGGG CGTTCATTCC GGGGATCCGC
CCGGGTGAGC AAACCACGCG GTATATCGAC AAGATTCTGG TGCGTCTGAC CCTGGCTGGT
GCGATTTACA TCACGCTGGT GTGTCTGTTG CCGGAGTTCT TGGTACTGCG CTGGAACGTG
CCGTTCTACT TCGGTGGAAC GTCGCTGCTG ATCATCGTGG TTGTCACGAT GGACTTCATG
GCGCAGGTGC AGTCGTACGT GATGTCTCAG CAGTACGAGT CTTTGATGAA GAAGGCGAAT
TTCAAGGGCA ACCTGACGCT CCGTTAG
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| Protein sequence | MATAKPNVMA QAKNTAKYGD LRRRLVFLVL ALLVYRIGAH IPVPGIDPDQ LAQLFQRQSG
GILGMFNLFS GGALSRFTVF ALGIMPYISA SIIMQLLTIV LPQLESLKKE GQAGQRKITQ
YTRYGTVVLA TFQALGIAVA LEAQPGLVLD PGLMFRATAV ITLVTGTMFL MWLGEQITER
GLGNGISIII FGGIAAGLPN AIGGLFELVR TGSMGIFSAI LVVAIIGAVT FLVVFIERGQ
RKILVNYAKR QVGNKIYGGQ SSHLPLKLNM AGVIPPIFAS SIILFPATIA GWFTAGNSTN
PVARFVKDLA STLSPGQPVY ILLYAAAIIF FCFFYTALVY NSREVADNLK KSGAFIPGIR
PGEQTTRYID KILVRLTLAG AIYITLVCLL PEFLVLRWNV PFYFGGTSLL IIVVVTMDFM
AQVQSYVMSQ QYESLMKKAN FKGNLTLR
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