Gene RSc2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2989 
SymbolhemB 
ID1221843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3222187 
End bp3223182 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID637239397 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionNP_521110 
Protein GI17547708 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA GCTTCCCCGA CCACCGCCCG CGTCGCATGC GCCGCGACGA CTTCTCCCGC 
CGGATGATGC GCGAATCGCG CCTGACGGCC GACGACCTGA TCTATCCGGT CTTCATCCTG
GAAGGCACCA ACGTACGCCA GGCCGTGCCG TCGATGCCGG GCGTCGAGCG CGTCTCCGTC
GACGTGCTGC TGGGCGTGGC CGAGCAATGC GTGCAGCTCG GGATTCCCGT GCTGGCGCTC
TTCCCCGTCA TCGAGCCGAG CCTGAAGACG CCGGACGGCA TCGAAGCCAC CAACGCCGAT
GGGCTGATCC CCCGCGCGGT CAAGGCGCTC AAGGCGCGCT TTCCGGAACT CGGCATCCTC
ACCGACGTGG CGCTCGACCC GTACACCAGC CATGGCCAGG ACGGCGTGCT CGACGATGCC
GGCTACGTGC TCAACGAAGA AACAGTCGAG ATCCTGACGC GCCAGGCGCT GGTGCAGGCC
GAGGCCGGGG TGGACATCGT CGCGCCGTCG GACATGATGG ACGGCCGCAT CGGCGCGATC
CGCCTGGCGC TGGAGAACGA CGACCACATC TACACACGCA TCATGGCCTA CGCGGCCAAG
TATGCGTCGG CGTTCTACGG CCCGTTCCGC GACGCGGTGG GCTCGGCGGC CAACCTGGGC
AAGGGCAACA AGATGACCTA CCAGATGGAC CCGGCCAACT CCGACGAGGC GCTGCGCGAA
GTGGCCCTCG ACATCGCCGA GGGCGCCGAC ATGGTGATGG TCAAGCCGGG CATGCCGTAC
CTCGACATCG TGCGCCGCGT GAAGGACGAG TTCCGTTTCC CGACCTACGT CTACCAGGTC
AGCGGCGAGT ACGCGATGCT CAAGGCTGCC GCCCAGAACG GCTGGCTGGA CCACGACAAG
GTCGTGCTGG AGTCGCTGCT GGCCTTCAAG CGCGCCGGTG CCAACGGCAT CCTGACCTAC
TTCGCGCTGG ACGCCGCGCG CCTGCTGCGC GGCTGA
 
Protein sequence
MIASFPDHRP RRMRRDDFSR RMMRESRLTA DDLIYPVFIL EGTNVRQAVP SMPGVERVSV 
DVLLGVAEQC VQLGIPVLAL FPVIEPSLKT PDGIEATNAD GLIPRAVKAL KARFPELGIL
TDVALDPYTS HGQDGVLDDA GYVLNEETVE ILTRQALVQA EAGVDIVAPS DMMDGRIGAI
RLALENDDHI YTRIMAYAAK YASAFYGPFR DAVGSAANLG KGNKMTYQMD PANSDEALRE
VALDIAEGAD MVMVKPGMPY LDIVRRVKDE FRFPTYVYQV SGEYAMLKAA AQNGWLDHDK
VVLESLLAFK RAGANGILTY FALDAARLLR G