| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2975 |
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| Symbol | pilM |
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| ID | 1221829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3207105 |
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| End bp | 3208175 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637239383 |
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| Product | fimbrial type-4 assembly protein |
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| Protein accession | NP_521096 |
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| Protein GI | 17547694 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.28529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCGGCC TGCTGCGCCG CAATATTGTC GGAATCGACA TCGGATCTTC CAGCGTCAAG
GTGGTGGAGT TGTCCGCCAA TGGCAAACAG GGAGACTTCC GGCTCGAGAA GTGCGCCAGT
GAGCTGATCG AACGCAGTGC CGTCGCTGAC GGCAATCTGG TCAATATCGA TGCGGTGGGC
AGCGCGCTCA AGCGCGCGAT CGCCAAGGCC GGCATCCGCA GCAAGGATGC CGTGCTCGCC
ATTCCGGCCA GTCTGACCGA GTCCCAGACC GTCAGCCTGC CCGACAATCT CACCGAGGAT
GAGCTGTTCG TCCAGGTCGA GAGCGAGGCC AACCGGCTGT TTCCGCCTTC GCAGAACGTC
AATTTCGACT ATGTCGTGAT CGGTCCGTCC GAGACCGAGG GCGGCATCGG CGTGCGCGTG
ATGGCGACGG TCGCCGAGCG CGTGACCGAG CGCGTGACGG CCGCCGAGAT GGCCGGCCTG
AGGCCGATCG TCATGGACGT GGAGGAAAAC GCCATCCAGC GCGCCATGAC CCACATGCGC
GCGGTGAAGA CCTCGGCCAC CGAGGCCGAG ATGCGGGACA TGCCCGTGGT GGCGATGTTC
CACCTCGGGG GGGCGAATTC GCAGGCCCTG TTCTATCAGG GCTGGAAGGA GCTGTACGAG
CAGCCGCTGT CCGGCTCGGG CGACCAGCTC ACACAGAGCA TCTCCCGCCT GTTCTCGCTC
GACCTGCTGA AGGCCGAGGT GAAGAAGCGC AAGAACACGC TGCCGGACGA ATACCGCAGC
CAGTTGCTCA AGCCTTCGCT GGAGACGCTG GCCATGGAAG TCAGCCAGGC GATCCAGAAC
TTCCTGTCGA CTTCCAGCGT CGGCCGCGTC GACGAGATCG TGCTGTCTGG CGGCCACGCG
TCGCTGCTCG GCGTGCAGAC GGCAATCCAA CAACAGACCC AGATCAATAC GACGCTGGCC
AACCCGTTCG CCAATATGGG CGCGGCCAAG AACGTCAACG CGCGTTATCT GCAACGCGAT
CTGCCGGCAT ACATCGTCAG CGCGGGCTTG GCCCTGCGCG GGCTGCAATA A
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| Protein sequence | MSGLLRRNIV GIDIGSSSVK VVELSANGKQ GDFRLEKCAS ELIERSAVAD GNLVNIDAVG
SALKRAIAKA GIRSKDAVLA IPASLTESQT VSLPDNLTED ELFVQVESEA NRLFPPSQNV
NFDYVVIGPS ETEGGIGVRV MATVAERVTE RVTAAEMAGL RPIVMDVEEN AIQRAMTHMR
AVKTSATEAE MRDMPVVAMF HLGGANSQAL FYQGWKELYE QPLSGSGDQL TQSISRLFSL
DLLKAEVKKR KNTLPDEYRS QLLKPSLETL AMEVSQAIQN FLSTSSVGRV DEIVLSGGHA
SLLGVQTAIQ QQTQINTTLA NPFANMGAAK NVNARYLQRD LPAYIVSAGL ALRGLQ
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