Gene RSc2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2970 
SymbolaroK 
ID1221824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3202401 
End bp3202973 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content66% 
IMG OID637239378 
Productshikimate kinase 
Protein accessionNP_521091 
Protein GI17547689 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGTTT CCAACGTTTT TTTCGTCGGC CTGATGGGGG CCGGCAAGAC CACTGTCGGG 
CGTGCCGTCG CCCGGCGGCT TGACTTGCCG TTCTTCGACT CCGACCACGA GATCGAAGCG
CGTTGCGGCG TGCGCGTGCC GGTCATCTTC GAGCATGAAG GCGAAATGGG CTTTCGCGAC
CGCGAAACCC AGATGATCGA TGAGCTGACC GCGCGCCACG GCGTGGTCGT GGCCACCGGC
GGCGGCGCCG TGCTGCGCCC GGAAAACCGC GCTTTCCTGC GCGAGCGCGG CACGGTGATC
TACCTGCGCG CCAATCCCCA CGACCTGTAC CTGCGCACGC GCCACGACAA GAACCGTCCG
CTGCTGCAGA CCGAGAACCC GCGCGCCAGG CTCGAGGAAC TGCACGCGAT TCGCGACCCG
CTGTACCGCG AGGTGGCGCA CTTTGTCATC GAAACCGGCA AGCCCACCGT GGCCCAGCTT
GTTAATATGG TGCTGATGCA ACTCGAAGTG GCCGGCATCG TGGTGCCGCC CGCCGCCTCT
TCCCCGACCT CGCAAGTCTC CCGCCAGTCA TGA
 
Protein sequence
MSVSNVFFVG LMGAGKTTVG RAVARRLDLP FFDSDHEIEA RCGVRVPVIF EHEGEMGFRD 
RETQMIDELT ARHGVVVATG GGAVLRPENR AFLRERGTVI YLRANPHDLY LRTRHDKNRP
LLQTENPRAR LEELHAIRDP LYREVAHFVI ETGKPTVAQL VNMVLMQLEV AGIVVPPAAS
SPTSQVSRQS