Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2970 |
Symbol | aroK |
ID | 1221824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3202401 |
End bp | 3202973 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239378 |
Product | shikimate kinase |
Protein accession | NP_521091 |
Protein GI | 17547689 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGTTT CCAACGTTTT TTTCGTCGGC CTGATGGGGG CCGGCAAGAC CACTGTCGGG CGTGCCGTCG CCCGGCGGCT TGACTTGCCG TTCTTCGACT CCGACCACGA GATCGAAGCG CGTTGCGGCG TGCGCGTGCC GGTCATCTTC GAGCATGAAG GCGAAATGGG CTTTCGCGAC CGCGAAACCC AGATGATCGA TGAGCTGACC GCGCGCCACG GCGTGGTCGT GGCCACCGGC GGCGGCGCCG TGCTGCGCCC GGAAAACCGC GCTTTCCTGC GCGAGCGCGG CACGGTGATC TACCTGCGCG CCAATCCCCA CGACCTGTAC CTGCGCACGC GCCACGACAA GAACCGTCCG CTGCTGCAGA CCGAGAACCC GCGCGCCAGG CTCGAGGAAC TGCACGCGAT TCGCGACCCG CTGTACCGCG AGGTGGCGCA CTTTGTCATC GAAACCGGCA AGCCCACCGT GGCCCAGCTT GTTAATATGG TGCTGATGCA ACTCGAAGTG GCCGGCATCG TGGTGCCGCC CGCCGCCTCT TCCCCGACCT CGCAAGTCTC CCGCCAGTCA TGA
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Protein sequence | MSVSNVFFVG LMGAGKTTVG RAVARRLDLP FFDSDHEIEA RCGVRVPVIF EHEGEMGFRD RETQMIDELT ARHGVVVATG GGAVLRPENR AFLRERGTVI YLRANPHDLY LRTRHDKNRP LLQTENPRAR LEELHAIRDP LYREVAHFVI ETGKPTVAQL VNMVLMQLEV AGIVVPPAAS SPTSQVSRQS
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