Gene RSc2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2968 
Symboldgt 
ID1221822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3200115 
End bp3201278 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID637239376 
Productdeoxyguanosinetriphosphate triphosphohydrolase-like protein 
Protein accessionNP_521089 
Protein GI17547687 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0232] dGTP triphosphohydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.728933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC GACTCGACCT GCTGCCCGCG CCGTTCGATC TGGAAGGCCA TCTTGCCCCC 
TATGCCGCAC ATGCCGCGCA GTCGCGCGGG CGCGTGCACG CCGAGCCGCC ATCCACCTCG
CGCACCGAGT TCCAGCGCGA TCGCGATCGC ATCATCCATT GCACGGCATT CCGCCGGCTC
GAGTACAAGA CGCAGGTTTT CGTCAACCAC GAAGGCGACC TGTTCCGCAC GCGGCTCACG
CACAGCCTGG AGGTCGCGCA GATTGCGCGG TCGATCGCCC GCAGCCTGCG GCTGAACGAA
GACCTGGTCG AGGCGATCTC GCTTGCGCAT GATCTGGGCC ATACGCCGTT CGGCCATGCC
GGACAGGACG CGCTCAACGA CTGCATGAAG CCCTACGGCG GCTTTGAACA CAACCTGCAA
AGCCTCCTGG TGGTGGACCG GCTGGAGGAG CGGTATGGCG GTTTCGATGG CCTGAACCTG
ACCTTCGAGA CCCGCGAGGG CATCCTCAAG CACTGCTCGC GCAACAATGC CGCCACGCTC
GGTGACCTGG GGCGCCGCTT CCTGGAGGGC CAGCAGCCGT CGCTGGAGGC CCAGTTGGCC
AACCTCGCCG ATGAAGTGGC GTACAACAAC CACGATATCG ATGACGGCCT GCGCTCCGGC
CTGATCACGC TGGAGCAGCT CGAAGGCGTG CCGCTATGGG CTCGGCACCG GCGCGAGGCC
GAGGCGGCGT TTCCGGGCGT CGGCGGGCGC CGCATGATCA ACGAGACGAT TCGCCGGATC
ATCAACGCGC TGATCGTCGA TCTGATCGCC GGCACACGCG CGGCCATTAC AGGGGCCGCG
CCGCAAAGCA TCGATGACGT GCGCGCCGCG CCGCCGCTGG TGGCCTTCTC GGAGCCGATG
CGCGACGAAG CCCGCGTGCT CAAGCGTTTC CTGTTCGATA ACCTTTACCG CCACTATCTG
GTGATGCGCA TGGCGGCCAA GGCGCGCCGC ATCATCGAGG ATCTGTTCCG TGTGTTCCTG
GAGGATCCGC GTCTGCTGCC GCCGCAGTAC CAGGCCAGGG ATCCCGCCGA CCAGCCGCGC
TGGATCGCGC ATTACATCGC CGGCATGACA GACCGCTACG CCATCAAGGA GCATCGGCGC
ATCTTCGCGG TCGAGGTACT CTGA
 
Protein sequence
MNDRLDLLPA PFDLEGHLAP YAAHAAQSRG RVHAEPPSTS RTEFQRDRDR IIHCTAFRRL 
EYKTQVFVNH EGDLFRTRLT HSLEVAQIAR SIARSLRLNE DLVEAISLAH DLGHTPFGHA
GQDALNDCMK PYGGFEHNLQ SLLVVDRLEE RYGGFDGLNL TFETREGILK HCSRNNAATL
GDLGRRFLEG QQPSLEAQLA NLADEVAYNN HDIDDGLRSG LITLEQLEGV PLWARHRREA
EAAFPGVGGR RMINETIRRI INALIVDLIA GTRAAITGAA PQSIDDVRAA PPLVAFSEPM
RDEARVLKRF LFDNLYRHYL VMRMAAKARR IIEDLFRVFL EDPRLLPPQY QARDPADQPR
WIAHYIAGMT DRYAIKEHRR IFAVEVL