Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2966 |
Symbol | |
ID | 1221820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3198300 |
End bp | 3199025 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239374 |
Product | hypothetical protein |
Protein accession | NP_521087 |
Protein GI | 17547685 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGCC TGCCTCGCCT CAGTCCCATC GATTCCCCGG TTCACGTGTT GCAGCGCGGC AACAATCGGC AGGCGGTGTT CCGCGCCGAT GAGGACTACG CTTTCTACCT CGATACGTTG CGCATGGCGG CGCGCGAGCA CGATTTCGCC ATCCACGCCT TTGCGCTGAT GCCGAACCAC GTGCACCTGG TCGGCACGCC CAAGGTGGCG GACAGCCTGT CGCGCACGCT GCAGGCCGTC GGCCGGCGCT ACACGCGCTA CTTCAACGCC GCGGCGGGCC GCAGCGGCAC GCTGTGGGAA GGGCGCTTCC GGTCGACGGT GCTGGACCCC GCCGAATGGG TGCTGCCGAT GATCCTGTAC GTGGAGGGCA ACGCCGTGCG CGCGGGCCTC GCCGTCACGC CGGAGGAGGA TCGCTGGAGC ACCTATCGCC ATCACGTCGG CATTCAGTCG ATTCCGTGGG TGAGCGATCA CTACTGCTAC TGGCGGCTCG GCAATACGCC ATTCGAGCGC CAGTCCCGCT ACCGGACCCT CTGGCACGAG GGGCTCGGCT CCGACCAGCT CGCCCGCATC CGGCAGCACG TGCACAGCGG CTGGCCGCTC GGCAGCGAGG CATTCCTGGC GACGCTGGCG CGGACGGGCG GGCGGCGCGT GGCACCGTTG CCGAAGGGCC GGCCGCCACG CGGTCCCGCA GAAGTGGGGG CGGAAACGCA GGCTGAAGCA GGCTGA
|
Protein sequence | MARLPRLSPI DSPVHVLQRG NNRQAVFRAD EDYAFYLDTL RMAAREHDFA IHAFALMPNH VHLVGTPKVA DSLSRTLQAV GRRYTRYFNA AAGRSGTLWE GRFRSTVLDP AEWVLPMILY VEGNAVRAGL AVTPEEDRWS TYRHHVGIQS IPWVSDHYCY WRLGNTPFER QSRYRTLWHE GLGSDQLARI RQHVHSGWPL GSEAFLATLA RTGGRRVAPL PKGRPPRGPA EVGAETQAEA G
|
| |