Gene RSc2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2947 
SymbolhisA 
ID1221801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3176590 
End bp3177333 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID637239355 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionNP_521068 
Protein GI17547666 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA TCCCGGCCAT CGACCTGAAG GACGGTCAGT GTGTGCGCCT CAAACAAGGC 
GATATGGATC AAGCCACCGT GTTCTCGGAA GACCCCGCCG CCATGGCGCG GCATTGGGTC
GACCAGGGCG CGCGCCGGCT GCATCTGGTC GATCTGAACG GCGCCTTCGT GGGCAAGCCC
CGCAACGAGG CGGCGATCAA GGCCATCATC GCCGAGGTGG GCAGTGAGAT TCCGGTGCAG
CTCGGCGGCG GCATCCGCGA TCTCAATACC ATCGAACGCT GGCTGGACGA CGGGCTGTCG
TACGTCATCA TCGGCACGGC GGCGGTCAAG AATCCGGGCT TCCTGCAGGA CGCCTGCACC
GCGTTCGGCG GCCACATCAT CGTTGGGCTC GATGCCCGCG ACGGCAAGGT GGCGACCGAC
GGCTGGAGCA AGCTGACCGG CCATGAAGTG GTGGATCTGG CCCGCAAGTA CGAAGACTAC
GGCGTCGAAT CCATCATCTA CACCGACATC GGCCGCGATG GCATGCTGCA GGGCATCAAT
ATCGACGCGA CGGTCAAGCT GGCGCAGTCG GTGTCGATCC CGGTGATCGC CAGCGGCGGC
CTGTCCAGCC TGAAGGACAT CGACCACCTG TGCGCCGTGG AGAGCGAGGG CGTGGAGGGC
GTGATCTGCG GGCGCGCCAT CTACTCGGGC GACCTCAATT TCCGGGAAGC GCAGGACCAC
GCGGACAAGC TCGGCGCGGC CTAA
 
Protein sequence
MLLIPAIDLK DGQCVRLKQG DMDQATVFSE DPAAMARHWV DQGARRLHLV DLNGAFVGKP 
RNEAAIKAII AEVGSEIPVQ LGGGIRDLNT IERWLDDGLS YVIIGTAAVK NPGFLQDACT
AFGGHIIVGL DARDGKVATD GWSKLTGHEV VDLARKYEDY GVESIIYTDI GRDGMLQGIN
IDATVKLAQS VSIPVIASGG LSSLKDIDHL CAVESEGVEG VICGRAIYSG DLNFREAQDH
ADKLGAA