| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2944 |
|---|
| Symbol | hisE |
|---|
| ID | 1221798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3174958 |
|---|
| End bp | 3175332 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637239352 |
|---|
| Product | phosphoribosyl-ATP pyrophosphatase |
|---|
| Protein accession | NP_521065 |
|---|
| Protein GI | 17547663 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA CCCTGCGCCG CCTGGGCGAG GTGCTCGAAT CACGCAAGCT CGCCAACGGC
GGTGACCCGG AGAAGAGCTA CATCGCCCGT CTGTTCCACA AGGGCGACGA CGCCATCCTC
AAGAAGATCG GCGAAGAGGC CACCGAGACC GTGATGGCCG CCAAGGACGC CCGCGCCGCC
GGCATGACCG ACGAGGCGCG CGGCAAGGTC GTCTACGAGG TGGCCGACCT GTGGTTCCAC
ACCATGGTGC TGCTGTCGCA CTTCGACCTG ACGCCCGACG ACGTGGTTAA CGAACTGGCG
CGCCGCGAAG GGCTCTCGGG CCTGGAGGAG AAGGCGCTGC GCAAGTCGCA GGCGCGCGAT
GCGGCCGGTG ACTGA
|
|---|
| Protein sequence | MSDTLRRLGE VLESRKLANG GDPEKSYIAR LFHKGDDAIL KKIGEEATET VMAAKDARAA
GMTDEARGKV VYEVADLWFH TMVLLSHFDL TPDDVVNELA RREGLSGLEE KALRKSQARD
AAGD
|
|---|
| |