| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2940 |
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| Symbol | tatC |
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| ID | 1221794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3172818 |
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| End bp | 3173621 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239348 |
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| Product | putative SEC-independent translocase protein TATC transmembrane |
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| Protein accession | NP_521061 |
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| Protein GI | 17547659 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.935622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG CTCCGCACGA TCCGCACGAT TCGCCCGAGG ACGGCGCACC GGAAACCTTC
ATCTCGCACC TGGTCGAGCT GCGCGAGCGC ATCGTCAAGG CCGGCGCGGG CGTGCTGCTG
ATCTTCCTGG GCCTGGTGTA CTGGGCGCCC GACATCTTCA ACCTGTTCTC GCGTCCGCTG
ATGCAGGCGC TGCCCAAGAA CGGCCACATG ATCGTCACCG ATGTCACCGG CTCGTTCTTC
GTGCCGATGA AGGTGACGCT GCTGGTGGCC TTCCTGGTCG CGCTGCCGTG GGTGCTGTAC
CAGATCTGGC GCTTCGTGGC GCCGGGGTTG TACGCGCACG AGAAGCGCAT GGTCCTGCCG
CTGGTGGTGA GCAGCTACGT GCTGTTCCTG TGCGGCGTGG CGTTCGCGTA CTTCCTGGTC
TTCCCGACCG TGTTCAAGTT CATGGCGCAC TACAACGCGC CGCTGGGCGC GGAGATGTCG
ACCGACGTCG ACAAGTACCT CAGCTTCGCC ATGACCACCT TCCTGGCCTT TGGCATCACC
TTCGAGGTGC CGGTGGTGGT GATCGTGCTG GTGCGCTTCG GCATCGTCAG CCTGGAGAAG
CTGCGGCAGA TCCGGCCGTA CGTGGTGGTG GGGGCGTTCG TGATCGCGGC CGTCGTCACG
CCGCCGGATG TGATGTCGCA GCTGTTGCTG GCCGTGCCGC TGTGGCTGCT GTACGAGCTG
GGCCTGATCC TGGCCGCGAT CTTCATCCGC AAGACCGCGG TGCCCGACAC CGAGACGGAA
CATCTTCCGG TGGTGAAGGA CTGA
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| Protein sequence | MSAAPHDPHD SPEDGAPETF ISHLVELRER IVKAGAGVLL IFLGLVYWAP DIFNLFSRPL
MQALPKNGHM IVTDVTGSFF VPMKVTLLVA FLVALPWVLY QIWRFVAPGL YAHEKRMVLP
LVVSSYVLFL CGVAFAYFLV FPTVFKFMAH YNAPLGAEMS TDVDKYLSFA MTTFLAFGIT
FEVPVVVIVL VRFGIVSLEK LRQIRPYVVV GAFVIAAVVT PPDVMSQLLL AVPLWLLYEL
GLILAAIFIR KTAVPDTETE HLPVVKD
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