| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2935 |
|---|
| Symbol | |
|---|
| ID | 1221789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 3166348 |
|---|
| End bp | 3167055 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637239343 |
|---|
| Product | putative response regulator transcription regulator protein |
|---|
| Protein accession | NP_521056 |
|---|
| Protein GI | 17547654 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCT TGCTGGTGGA GGATGAAGGG GAACTGGCGG CGTGGCTCGC GCGCGCGCTG
GCGCAGAGCG GCTTCGTGGT GGAGCGCGCG GCGGACGGGC TGGCGGCGGA AGCGTTCCTG
GCCTCGGGCG AATTCGACGC CGTCGTGCTG GACCTGCGCC TGCCGCGCAA GGACGGCTTT
GCCGTGCTGG CCGACATGCG CGCGCGCGAC GATCGCACGC CGGTGCTGAT CCTGACGGCC
CAGGGCGCAC TGGACGAGCG CGTGCGCGGC CTGAACGCCG GCGCCGACGA CTTCCTCACC
AAACCGTTTG CGCTGACGGA GCTCGAAGCG CGGCTGATGG CGCTGATCCG CCGCAGCCGG
GGCCGGGCGT TCCCGCGCCT GCGCTGCGGA CCGCTGGAAT TCGACACCGG CCGCAAGGCC
TTCCTGCTGG CGGGCGAGCC GCTGTCGCTG ACGCCGCGCG AGCACGCCGC GCTGTCCGCG
CTGCTGCACA AGACCGGGCA ACCGATCAGC AAGGTCCATC TGTTCGACAA GGTGTTCAAC
CTGGACAGCG ATTCCAGCCC GGACGCCGTG GAAGTGGTCG TGCATCGCCT GCGCAAGAAG
CTGGCGGGGT CCGGTGTGCA GATCGTCACG GTGCGCGGGC TGGGCTACCT GCTCGAAGCC
GAAGCGAGCG GCGTCCCGCA GGCGGCGGGC GACACATCCG CGCCATGA
|
|---|
| Protein sequence | MRILLVEDEG ELAAWLARAL AQSGFVVERA ADGLAAEAFL ASGEFDAVVL DLRLPRKDGF
AVLADMRARD DRTPVLILTA QGALDERVRG LNAGADDFLT KPFALTELEA RLMALIRRSR
GRAFPRLRCG PLEFDTGRKA FLLAGEPLSL TPREHAALSA LLHKTGQPIS KVHLFDKVFN
LDSDSSPDAV EVVVHRLRKK LAGSGVQIVT VRGLGYLLEA EASGVPQAAG DTSAP
|
|---|
| |