Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2930 |
Symbol | mscL |
ID | 1221784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3160747 |
End bp | 3161172 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637239338 |
Product | large-conductance mechanosensitive channel |
Protein accession | NP_521051 |
Protein GI | 17547649 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTAA TGCAAGATTT CAAGAAATTC GCAATGCGCG GCAACGTGAT CGACTTGGCG GTCGGTGTGA TCATCGGTGC GGCGTTTGGC AAGATCGTCG ACTCGCTGGT CAACGACCTG ATCATGCCGC TGGTTGCGCG CATCGTCGGC AAGCTCGATT TCTCGAATCT GTTCATTCAA CTGGCCGATG CACCCGCGGG CGTGCCACAG ACGCTGGCCG ACCTGAAGAA AGCGGGCGTG CCGGTCTTCG CCTACGGCAA CTTCATCACG GTCGCCGTCA ACTTCCTGAT CCTGGCCTTC ATCGTGTTCC TGATGGTGCG CGCGATCACC CGCGTGATCG ACACCAACCC GCCGCCGGCC GACACGCCGG AAAACACGCT GCTGCTGCGC GATATCCGCG ACAGCCTGAA ATCCAAGAAT CAATAA
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Protein sequence | MALMQDFKKF AMRGNVIDLA VGVIIGAAFG KIVDSLVNDL IMPLVARIVG KLDFSNLFIQ LADAPAGVPQ TLADLKKAGV PVFAYGNFIT VAVNFLILAF IVFLMVRAIT RVIDTNPPPA DTPENTLLLR DIRDSLKSKN Q
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