Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2928 |
Symbol | petB |
ID | 1221782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3158487 |
End bp | 3159890 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637239336 |
Product | putative cytochrome B subunit transmembrane protein |
Protein accession | NP_521049 |
Protein GI | 17547647 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTG AGAAGAAGGT GGAGACAACC GGGCTGCTGG GCTGGATCGA TGCCCGCTTC CCGCTGACCG AGACATGGAA GGCGCACCTG TCGGAGTACT ACGCGCCCAA GAATTTCAAT TTCTGGTACT TCTTCGGTTC GCTGGCGCTG CTGGTGCTGG TGATCCAGAT CGTCACCGGG ATCTTCCTCG TGATGAACTA CAAGCCGGAC GGCACGCTCA ACGCCGCCGG CATCCCGGTC GCCTACGCGA GCGTGGAGTT CATCATGCGC GAGGTGCCGT GGGGCTGGCT GGTGCGATAC ATGCACTCGA CCGGCGCCTC GGCATTCTTC ATCGTGGTCT ACCTGCACAT GTTCCGCGGG ATGCTGTACG GCTCGTACCG CAAGCCACGC GAGCTGGTCT GGATCTTCGG CTGCCTGATC TTCCTGTGCC TGATGGCCGA GGCCTTCATG GGCTATCTGC TGCCCTGGGG CCAGATGTCG TACTGGGGCG CGCAGGTGAT CGTGAACCTG TTCTCCGCCA TCCCGCTGAT CGGGCCGGAT CTGTCGCTGT GGATCCGCGG CGACTACGTC GTGTCGGACG CGACGCTGAA CCGCTTCTTC TCGTTCCACG TCATCGCCGT GCCGCTGGTG CTGCTGGGCC TGGTGGTGGC GCACATCATC GCGCTGCACG AGGTGGGCTC GAACAACCCG GACGGCGTCG AGATCAAGGC CAAGAAGGAC GAGCGCGGTA TTCCGCTCGA TGGCATCCCG TTCCACCCGT ACTACTCGGT GCATGACATC GTCGGCGTGG CGGTGTTCCT GTTCCTCTTC AGCGCGATCC TGTTCTTCGC GCCGGAAATG GGCGGCTACT TCCTGGAGGC CAACAACTTC ATCCCGGCGG ATTCGCTGAA GACGCCGCCG CACATCGCGC CGGTGTGGTA CTTCACGCCG TTCTACTCGA TGCTGCGCGC GACGACGTCG GCTTTCCTGC CGATCCTGTG GGGGTTCCTG GCGATCATGT TGGGCCTGCT GTTCGTGCGC TGCAAGAGCA TGAAGATCAA GGGCGTGGCC GTGGCGGTCG CCGTGATCCT GGCGCTGGGC TTTGCTTTCA TCGACGCCAA GTTCTGGGGC GTGGTGGTGA TGGGCGGCTC GGTGGTGATC TTCTTCTTCA TGCCGTGGCT GGACCAGTCG CCGGTCAAGT CGATCCGCTA TCGCCCGGGC TTCCACAAGG TGCTGCTGGG GATCTTCGTG GTGGCCTTCG CGGTGCTCGG CTACCTCGGC ATCCAGCCGC CTAGCCCGGC GGGCTCGATC GTGTCGCAGA TCGGCACCAT CGTGTACTTT GCGTTCTTCC TCGCGATGCC GGTCTGGAGC CGGATGGGGA CGTTCAAGCC GGTGCCCGAG CGTGTCACGT TCAAGCCGCA CTGA
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Protein sequence | MAAEKKVETT GLLGWIDARF PLTETWKAHL SEYYAPKNFN FWYFFGSLAL LVLVIQIVTG IFLVMNYKPD GTLNAAGIPV AYASVEFIMR EVPWGWLVRY MHSTGASAFF IVVYLHMFRG MLYGSYRKPR ELVWIFGCLI FLCLMAEAFM GYLLPWGQMS YWGAQVIVNL FSAIPLIGPD LSLWIRGDYV VSDATLNRFF SFHVIAVPLV LLGLVVAHII ALHEVGSNNP DGVEIKAKKD ERGIPLDGIP FHPYYSVHDI VGVAVFLFLF SAILFFAPEM GGYFLEANNF IPADSLKTPP HIAPVWYFTP FYSMLRATTS AFLPILWGFL AIMLGLLFVR CKSMKIKGVA VAVAVILALG FAFIDAKFWG VVVMGGSVVI FFFMPWLDQS PVKSIRYRPG FHKVLLGIFV VAFAVLGYLG IQPPSPAGSI VSQIGTIVYF AFFLAMPVWS RMGTFKPVPE RVTFKPH
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