| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2920 |
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| Symbol | |
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| ID | 1221773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3146828 |
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| End bp | 3149233 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239327 |
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| Product | putative hydroxamate-type ferrisiderophore receptor signal peptide protein |
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| Protein accession | NP_521041 |
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| Protein GI | 17547639 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCGAC ATCGCCGACC GGTACGCCAG TCCCGCGCGC CGCGCCCGGG CGCGCTGGCC
GCCGCCGCGC TATTTGCCAG CACCGCCATC GCGCAATCGC GCATGGTCAT CGACATTCCC
GCCGAGCCGC TCGATGCGGC GCTGAACACG CTGGCGCGGC AGGCGGGCAC CCAGCTCGTG
TTCGCCAGCG CGCTGACGGC CGGCAAGACC GCGCCGCACG TGCAGGGTCA CTACAGCGTC
GAGGAGACCC TGAACCGCCT GCTGGCGCAG AGCGGGCTGA CGGCGCGCCG GCAGGGCGAC
AACACCTTCA CCATCGAGCC GGCCGGCAGC GGCGCCGAAG TCACCCTGCC GGCCACCGTC
ACCACCGCCG CGCAGGCCGA ATCCGCCAAC GGCCCGGTGC ACGGCTACGT CGCCCGGCGC
AGCGCGACCG GCACCAAGAC CGATGCGCCG ATCGAAGAGA TTCCGCAGTC GATCAGCGTG
GTGACGCGCG ACCGCTTCGA AGCCCAGGGC GCGCAGAGCG TCAACGAGGC CCTGCGGTAT
ACGGCATCGG TATCGACCTA CGGCGCGGGC ACCCGCTCGG ACTGGTACAC CGCCGTGCGC
GGCTTCGTGC CGGCCACCTA CCTGGACGGC CTGCAGTTGC CCAACACCAT CAACCTGGCC
AGCTGGCGCG TCGACCCGTG GCAGATCGAG TGCGTCGAGC TGCTGCGGGG ACCGGCTTCC
GTGCTGTACG GCCAGGGCGA CCCGGGCGGC ACCGTCAACG TCGTCACCAA GCAGCCGACC
GCCGAGCCCA TCCGCGAGAT CGAGGTGCAA TACGGCAGCC ATGTGCGCAA GCAGGTGGCC
GGCGATTTCG GCGGCGCGCT CGATGCCGAC GGCAAGCTGT CGTACCGACT GACCGCCCTG
GCGCGCGACG GCAACCTGCC GCTGGGGCCG TTCAACGACC AGCGCCTGAT GATCGCGCCG
TCGCTGACCT GGAAGCCGTC GGCCGACACC ACGCTGACGC TGCTGGCAAA CTACCTGCGC
GACAAGACCA ATGCGTCGGA CAGCTTCCTG CCGGCGCAGG GCACCATCCT GCCGAACCCG
AACGGCAAGA TTCCCGCCAC CCGCTTCACC GGCTCGCCGG ATTTCGACGC GTACGAGAAG
ACGCAGTATT CGCTGGGCTA CCAGTTCGAG CATCGCCTGG ACGACACCTG GACGGTACGC
CAGAACGCGC GCTACATGCA CCTCAGGCTC GACGACCGCA TGACCTACGG TGTCGGCCTG
GACCCGAGCG ACCCGACGCA GCGCACCCTG CTGCGCTACG CCGGCATCGC GCAGCCGAGC
TACGGGCGGC TGGACATCGA CACGCAGGCG CAGGCCCGGT TCGCCACCGG CATGGTGCGG
CACACGCTGC TGGCCGGCGT CGACTACCAG CGCCAGACCA CCAGGGACCC GGAGAACTAC
GCGCTCACCT CGTCGCTTGA CCTTTACAAC CCGGTGTATC AGCCGACCGA CCGGTCGATC
TTCAGCGGCC CGGGCGCATC GCCGCAGGAC ATCCGCCAGC GGCAGACCCA GTTGGGCCTC
TATCTACAGG ACCAGCTCAA GCTGGGCGAG CGCTGGGTCT TCACGCTGGG CGGCCGACAC
GACTGGGCCG ACACGCGCAC CGACGACCTG CTCGGCGGCA CCACCGCCAG CCAGCGCGAT
GCCGCCTTCA CCGGGCGCGT GGGCGTGGTG TACCTGGCGC CGTACGGCAT CTCGCCGTAC
CTGAGCTATT CGACCTCGTT CAACCCGACC GTCGGCACCG ACCGCAACGG CCAGGCCTTC
AAGCCGACCA AGGGCCGGCA AGTCGAGGCC GGGGTGAAGG TCCAGGCCGG CAGCAAGGCG
TCGGTCACGG CATCGGTCTT CCGGATCCAC CAGCGCAACG TGCTGACGCC CGACCTGGAC
GATCCGGCCG GCACGCACAG CACGCAGACC GGCGAGGTGC GCTCGCAGGG CTTCGAGCTG
GAAGCCACCG TGCAGCCGAT GGCGGGCTGG AACGTGATTG CCGGCTACAT CTACCAAGAC
GTGCGCAACA CCCGCGCCAA CGACGCCTCG CTCGACAAAT GGCCGATCGC CATCCCCACC
CCGCGCCAGA TCGCCTCGCT GTGGACGGAC TACCGCATCC GCTCGGGCGT GCTGCAGGGC
GTGGGCATCG GCGCCGGCGT GCGCTACGTC AGCCCCACGG CTGGCGCGCC GGACAACGCG
CTGCGCGTGC CCGGCTATGC GCTGTTCGAC GCGGCCATCT TCTACAGCGC CGGCCGCCAT
TGGCGCCTGG CGCTCAACGG CACCAACCTG GCCAACCGCG AAGTCATCTC CGGCTGCTAT
GACGCCACGC GGTGCATCTA CGCCAACGGC CGCACCGTGC TCGCGACCGC GAAATACGCC
TGGTAG
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| Protein sequence | MNRHRRPVRQ SRAPRPGALA AAALFASTAI AQSRMVIDIP AEPLDAALNT LARQAGTQLV
FASALTAGKT APHVQGHYSV EETLNRLLAQ SGLTARRQGD NTFTIEPAGS GAEVTLPATV
TTAAQAESAN GPVHGYVARR SATGTKTDAP IEEIPQSISV VTRDRFEAQG AQSVNEALRY
TASVSTYGAG TRSDWYTAVR GFVPATYLDG LQLPNTINLA SWRVDPWQIE CVELLRGPAS
VLYGQGDPGG TVNVVTKQPT AEPIREIEVQ YGSHVRKQVA GDFGGALDAD GKLSYRLTAL
ARDGNLPLGP FNDQRLMIAP SLTWKPSADT TLTLLANYLR DKTNASDSFL PAQGTILPNP
NGKIPATRFT GSPDFDAYEK TQYSLGYQFE HRLDDTWTVR QNARYMHLRL DDRMTYGVGL
DPSDPTQRTL LRYAGIAQPS YGRLDIDTQA QARFATGMVR HTLLAGVDYQ RQTTRDPENY
ALTSSLDLYN PVYQPTDRSI FSGPGASPQD IRQRQTQLGL YLQDQLKLGE RWVFTLGGRH
DWADTRTDDL LGGTTASQRD AAFTGRVGVV YLAPYGISPY LSYSTSFNPT VGTDRNGQAF
KPTKGRQVEA GVKVQAGSKA SVTASVFRIH QRNVLTPDLD DPAGTHSTQT GEVRSQGFEL
EATVQPMAGW NVIAGYIYQD VRNTRANDAS LDKWPIAIPT PRQIASLWTD YRIRSGVLQG
VGIGAGVRYV SPTAGAPDNA LRVPGYALFD AAIFYSAGRH WRLALNGTNL ANREVISGCY
DATRCIYANG RTVLATAKYA W
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