| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2905 |
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| Symbol | ubiX |
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| ID | 1221758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3131475 |
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| End bp | 3132131 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239312 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | NP_521026 |
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| Protein GI | 17547624 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.875858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTTCGT CCCTGGACGC CGGCTCCGGT CCGGCGGCAT CCGCCCAGCC GGCCACGGCC
GGCGCACGGC GCGCGCGGCG CATCATCGTC GCGATCACCG GGGCGTCCGG CGCGATCTAC
GGCGTGCGGC TGCTGCAGGT CCTGCGCGAT ACGGCGGGCG TGGAATCGCA CCTGCTGATG
TCGCCCGCCG GCCTGATGAA CGTGCAGCAC GAGCTGCAGA TGACCCGCGA GGAAGTGGAA
GCACTGGCAC ACGTGGTGCA CAACGTGCGC GACATCGGCG CGACCATCGC CAGCGGCTCG
TTCGCCGCCG AGGCCATGGT GGTGGCCCCC TGTTCGATGA AGACGCTGGC GGCCATCGCG
CACGGCCTGT CGGACAACCT GATCGCCCGC GCGGCGGACG TCACGCTCAA GGAACGCCGC
CGGCTGATCC TGATGGTGCG GGAAACGCCG CTCAATCTTG CGCACCTGCG CAATATGACG
GCGGTCACGG AGATGGGCGG CATCGTCTTC CCGCCCGTGC CCGGCTTCTA TCAGCGGCCC
AAGACCATCG ACGACCTCGT CGACCACACG GTCGGGCGCG TGCTCGACCT GCTCGGCCTG
CCGCAGACGC TGGCGGCCAG CTGGCCGGGG CTGCAATCGG CCGAATCGCC GCCGTAA
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| Protein sequence | MTSSLDAGSG PAASAQPATA GARRARRIIV AITGASGAIY GVRLLQVLRD TAGVESHLLM
SPAGLMNVQH ELQMTREEVE ALAHVVHNVR DIGATIASGS FAAEAMVVAP CSMKTLAAIA
HGLSDNLIAR AADVTLKERR RLILMVRETP LNLAHLRNMT AVTEMGGIVF PPVPGFYQRP
KTIDDLVDHT VGRVLDLLGL PQTLAASWPG LQSAESPP
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