| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2890 |
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| Symbol | |
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| ID | 1221743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3117916 |
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| End bp | 3119781 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239297 |
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| Product | hypothetical protein |
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| Protein accession | NP_521011 |
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| Protein GI | 17547609 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.633242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA TCCGCTACAC CATCGCCCCC GCCGCGCCCG AGGCGCATCT GTTCACCGTC
ACCGTCACGG TCGACGCGCC CGACCCGCAG GGCCAGCGCT TCTCGCTGCC GGCGTGGATT
CCGGGCAGCT ACATGATCCG CGAGTTCGCT CGCAACATCG TGCGCATCGA GGCGATGTGC
GGCGAGCGCG CGGTGCGCCT GGCCAAGCTC GACAAGCACA CCTGGCAGGC GGCGCCGTGC
AGCGGGCCGC TGACGGTGTC GTACGACGTG TACGCATGGG ACCTGTCGGT GCGGGCCGCG
CACCTCGACC CCACGCACGG CTTCTTCAAC GGCACCTCGG TGTTCCTGCG CGTGGAGGGG
GGCGAGCAGG TCCGCTGCCT GGTCGACATC CAGCCGCCCG CGGGCGATGC CTACCGCGGC
TGGCGCGTCG CCACCGCATT GCGCGAGGCG AGTGGCCGCG TGCAGGGCAG GGTGGGCGCC
AAGCGTTACG GCTTCGGCTG GTACGAGGCC GCCGACTATG ACGAGCTGAT CGATCATCCG
GTCGAGATGG GCACCTTCGC GCTGGTCTCG TTCGAGGCCT GCGGTGCGCA GCACGACGCC
GTCTTCACCG GCCGCGTGCC GAACCTGGAC CTGGAGCGCA TCGCCCGCGA CTTCAAGCGC
ATCTGCGAGG CGCAGATCCG CTTGTTCGAG CCGCATACCG CCGCCGCGCC CTTCCTCGAC
AGCAATCGCC GCTACGTCTT CATGACCATG GTGACGACCG ATGGTTACGG TGGCCTGGAA
CATCGCGCCA GCACCGCGCT GATATGCGCG CGCAACGACC TGCCCGTGAC CGGCCGCGAC
GAGACCACCG AGGGCTACCG CACCTTCCTC GGCCTGGTCA GCCACGAGTA TTTCCATACC
TGGAACGTCA AGCGCATCAA GCCGGCCGTC TTCGTGCCGT ACGCGCTGGA TCGCGAGGTG
CACACGCCGC TGCTGTGGCT GTTCGAGGGC TTCACCAGCT ACTACGACGA CCTGATGCTG
GTGCGCTCGG GGCTGATCTC GGAAGCCCAG TACCTCGAGA TGCTCGCCAA GACCTGGAAC
GGCGTGCTGC GCGGCAGCGG GCGTCTGAAG CAGAGCGTGG CGGAAAGCTC GTTCGATGCC
TGGACCAAGT ACTACCGCCA GGACGAGAAC GCCCCCAATG CCATCGTCAG CTACTACACC
AAGGGCTCGC TGGTGGCACT GGCGCTGGAC CTGACCATCC GCACGCAGAC CGGCGGCGAG
CATTCGCTCG ACGACGTGAT GCGCGCGCTG TGGGCCGCCG GCGGCCGCGA CTTCTACGCG
CCCGGCCACG CCCAGCGCGG CGTCACCGAA GCCGAGCTGA TCGCACTGAT GGAAGAGACC
ACCGGCCTGC GCCTGCGCAC GCTGGTGCGC CAACTGGCCG AGGGCCGGGA CGATCCGCCG
CTGCCCGCGC TGTTCAAGGC GATCGGCGTG ACGGCCACGC GCAAGCCGGC CGAGGCCGCG
CTGGGCCTGG GCGCCAAGGT CGGCGCGGAG AACGGCTTCG TCAAGCTGCT GCAGGTGTTC
GACGGCGGAC CGGCGCAGCG CGCCGGCCTG TCCGCGGGCG ACCTGGTCGT CGCGGTGGAT
GGCCTGCGCG TGCTGTCCGG CCAACTCGAC AAGAGCCTGG CGCGCCACCG CGCCGGCGAC
ACCGTGCCCG TGCATGTGTT CCGCCGCGAC GAGTTGATGC AGCTGGACGT GACCCTGTCC
GCGGACGCCA CGCCGCAGTT CGCGCTGGCG CTGTCGGCCG AGCCGTCGCC GCTGCGCTCG
GCGTGGCTGG GCAAGCGCGC CGCGGCCCGT GGTGCCCGCC CGGCGAAGTC CAGGTCGGCG
GCCTGA
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| Protein sequence | MKPIRYTIAP AAPEAHLFTV TVTVDAPDPQ GQRFSLPAWI PGSYMIREFA RNIVRIEAMC
GERAVRLAKL DKHTWQAAPC SGPLTVSYDV YAWDLSVRAA HLDPTHGFFN GTSVFLRVEG
GEQVRCLVDI QPPAGDAYRG WRVATALREA SGRVQGRVGA KRYGFGWYEA ADYDELIDHP
VEMGTFALVS FEACGAQHDA VFTGRVPNLD LERIARDFKR ICEAQIRLFE PHTAAAPFLD
SNRRYVFMTM VTTDGYGGLE HRASTALICA RNDLPVTGRD ETTEGYRTFL GLVSHEYFHT
WNVKRIKPAV FVPYALDREV HTPLLWLFEG FTSYYDDLML VRSGLISEAQ YLEMLAKTWN
GVLRGSGRLK QSVAESSFDA WTKYYRQDEN APNAIVSYYT KGSLVALALD LTIRTQTGGE
HSLDDVMRAL WAAGGRDFYA PGHAQRGVTE AELIALMEET TGLRLRTLVR QLAEGRDDPP
LPALFKAIGV TATRKPAEAA LGLGAKVGAE NGFVKLLQVF DGGPAQRAGL SAGDLVVAVD
GLRVLSGQLD KSLARHRAGD TVPVHVFRRD ELMQLDVTLS ADATPQFALA LSAEPSPLRS
AWLGKRAAAR GARPAKSRSA A
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