| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2884 |
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| Symbol | trpD |
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| ID | 1221737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3111530 |
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| End bp | 3112567 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239291 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | NP_521005 |
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| Protein GI | 17547603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.38417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTT CTCCGCAGGA CGCGCTGACC CGCTGCATCG AGCATCGCGA GATCTTCCAC
GACGAAATGC TGCACCTGAT GCGGCTGATC ATGCGCGGCG AGATGTCGCC GGTGATCGCC
TCGGCGCTCA TCATGGGGCT GCGCGTCAAG AAAGAGACGA TCGGCGAAAT CGCTGCCGCG
GCCACCGTGA TGCGCGAATT CGCCACCACG GTGGACGTGC CGGCGGCGAT CCTGGATCAC
TTTGTCGACA TCGTCGGCAC CGGCGGCGAC GGCGCCAACA CCTTCAATAT CTCCACCGCG
TCGATGTTCG TGGCCGCCGC GGCCGGCGCG CGCATCGCCA AGCACGGCGG GCGCGGCGTG
AGCTCCAAGT CGGGCAGCGC CGACGTGCTG GAGGCGCTGG GCGTCAACAT CATGCTGACG
CCCGAGCAGG TGGCGCAAAG CATCGAGGCG GTGGGCATCG GCTTCATGTT CGCGCCCAAT
CACCATCCGG CGATGAAGAA CGTCGCGCCG ATCCGCAAGG AGCTGGGCGT GCGCACCCTC
TTCAACATCC TGGGGCCGCT GACCAATCCG GCCGGCGCGC CGAACATCCT GATGGGCGTG
TTCCATCCGG ACCTGGTCGG CATCCAGGTG CGCGTGATGC AGCGCCTCGG TGCCAGGCAT
GCGGTGGTGG TCTATGGTAA AGACGGGATG GACGAAGTGT CGCTGGGCGC CGCCACGGTG
GTCGGCGAGC TCAAGGACGG CGAAGTGCGC GAGTACGAAA TCCATCCGGA AGACTACGGC
CTGCAGATGG TCTCCAACCG GGGCCTGAAG GTGGCCGACG CAGAGGAATC CAAGGCGATG
TTGCTCGGCG CTCTGGAGAA CGTGCCCGGC ACGCCACGCG AGATCGTGAC GCTCAATGCG
GGCGCGGCGC TGTATGCGGC CAACCTGGCC GGCTCGATCG GCGATGGCAT CACGCTGGCG
CGCGAGGCGA TCGCATCCGG CGCGGCACGC GCCAAGGTGG ACGAGCTGGT GCGCGTGACC
AATCAATTCA AGAAGTGA
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| Protein sequence | MTISPQDALT RCIEHREIFH DEMLHLMRLI MRGEMSPVIA SALIMGLRVK KETIGEIAAA
ATVMREFATT VDVPAAILDH FVDIVGTGGD GANTFNISTA SMFVAAAAGA RIAKHGGRGV
SSKSGSADVL EALGVNIMLT PEQVAQSIEA VGIGFMFAPN HHPAMKNVAP IRKELGVRTL
FNILGPLTNP AGAPNILMGV FHPDLVGIQV RVMQRLGARH AVVVYGKDGM DEVSLGAATV
VGELKDGEVR EYEIHPEDYG LQMVSNRGLK VADAEESKAM LLGALENVPG TPREIVTLNA
GAALYAANLA GSIGDGITLA REAIASGAAR AKVDELVRVT NQFKK
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