| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2880 |
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| Symbol | gph |
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| ID | 1221733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3107827 |
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| End bp | 3108567 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239287 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | NP_521001 |
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| Protein GI | 17547599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.587243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACG CGCTGCCGGC CGGGCCCGTG CGCGTCGTCA TCATCGACCT GGACGGGACG
ATGGTGGACA CGGCGGGCGA CTTCCACGCC GCCATCAACG CGATGCTGGA GACGCTGGGC
GCCGCGCCGG ACATGCCGGC GCAGGAGATC GTCGGGTATG TGGGCAAGGG TTCGGAAAAC
CTGGTGCGCC GCGTGCTCGA CGCGCGCCTG CCGCCTGCCC AGGCCAACAG CCGCTTCGCT
GAAGCGCTCG ACGCCTATCA GCGCGCCTAC CTCGCCATCA ACGGCCGGTA CGCGCGCGTC
TACGACGGCG TGCGCGAGGG CCTGGACGCG CTGCGCGGCA TGGGCCTCGC GCTGGCCTGC
GTGACCAACA AGCCGCACGA TTTCACCCAG CCGCTGCTGG CGCAGTTGGG CCTGGCCCCC
TGTTTCGACC TCGTTTATCC GGGCGACGCC TTCCCCTATC GCAAGCCCGA TCCGTACCCC
ATGCTGCGCG TGGCGGAGGC CTTCGGCGTG AGCCCGGCAG ACATCGTCGC CATCGGCGAT
TCGGAGAACG ATGCCCGCGC CGCCCGCGCT GCCGGCATGC GCGTGCTGGC GGTGCCATAC
GGCTACAACC ATGGCCAGCC TGTACAAGCG GCGGGAGCCG ATGCTATAGT CGATTCGCTT
TTTGCGGCAG CGCAGCTGAT CCGGCCCCAT GCCACATCGG GCCACACCAT GCACCGCGCC
ATGTCTGCCG CCTCCAACTG A
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| Protein sequence | MTDALPAGPV RVVIIDLDGT MVDTAGDFHA AINAMLETLG AAPDMPAQEI VGYVGKGSEN
LVRRVLDARL PPAQANSRFA EALDAYQRAY LAINGRYARV YDGVREGLDA LRGMGLALAC
VTNKPHDFTQ PLLAQLGLAP CFDLVYPGDA FPYRKPDPYP MLRVAEAFGV SPADIVAIGD
SENDARAARA AGMRVLAVPY GYNHGQPVQA AGADAIVDSL FAAAQLIRPH ATSGHTMHRA
MSAASN
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