Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2876 |
Symbol | |
ID | 1221729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3105124 |
End bp | 3106266 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239283 |
Product | putative membrane-bound lytic murein transglycosylase A transmembrane protein |
Protein accession | NP_520997 |
Protein GI | 17547595 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.268076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAA CAACCTTGGA CGCCTCGACT CGAGCGCACA CCGTCCACCG GCGCGGATGG GCCGGCCTGT CCGCCGCACT GGTCGCCGTC CTGCTGGCGG CCTGCACCAG CGGCCCGCCG CCACGCCTGG AAGCGCCGCA GGCGCCGACC GCCACGCTGG GCGGCGGCCT GCAGCCCGCC ACCTGGGCCG ACGTGGCCGG CTGGACCACC GACGATCTCG CCTCCGCTTG GCCCGCGCTG CAATCGAACT GCCTGGCGAT GAAGCGTCGC GCCGACTGGG CACGCGTCTG CGCCGCCGGC CTGATGGTCG ATGCCGGCGA TCCGATCGCC ATGCGCACCT TCTTCGAAGA CAACTTCACG CCCTACCGCG TGGTCAAGGA CGACGGTACC GACAGCGGCC TGATCACCGG CTACTACGAG CCATTGCTGC GCGGCTCGCG CACGCGTCAC GGCGTGTACC AGACCCCGCT GTACCGCATG CCCGCCGCCT GGCGCGGCAA GACCCTGCCG GCGCGCGTCC AGCTGATCCG CAGCCCCGCG CTGGCGGGCA ACGAGGTCGT CTGGGTGGAC GATCCCGTCG AAGCGGCCTT CCTGCAGATC CAGGGCTCAG GCCAGGTCCA GCTGGAAGAG GGCGGCATCA TGCGCCTGGG CGTGGGCGGC ACCAACAACC AGCCGTTCCG CTCGTTCGCG CGCTGGCTGC TCGACCAGGG CGAAATCACC CCGGTGCAGG CCACCATGCA GGGCATCAAG GCATGGGCAC GCGCCAACCC CGGCCGCGTC GACGAGATGC TCAACATCAA CCCGCGCTAC GTGTTCTTCA ACGAGAACCC GGGCAACAGC GACGGTCCGA TCGGCAAGCT GGGCGTGCCG CTCACGGCCG AGCGCTCGAT CGCGGTGGAC CCGGGCTACA TCCCGCTCGG CGCGCCGGTG TTCCTGTCGA CCACCAAACC GCTGTCGACC GAGCCCATCC AGAAGCTGGT CTTCGCGCAG GACGTGGGCT CGGCCATCCG TGGCGCCGTG CGCGCCGACT ACTACTTCGG CCACGGCGAC GCGGCAGGCG ACCTGGCCGG CCGCATGAAG CAGGCCGGCC GGCTGTGGGT GCTGGTGCCG AAGGGCAGCC CCGTCGGCGT GGCCTCGCGC TAG
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Protein sequence | MTATTLDAST RAHTVHRRGW AGLSAALVAV LLAACTSGPP PRLEAPQAPT ATLGGGLQPA TWADVAGWTT DDLASAWPAL QSNCLAMKRR ADWARVCAAG LMVDAGDPIA MRTFFEDNFT PYRVVKDDGT DSGLITGYYE PLLRGSRTRH GVYQTPLYRM PAAWRGKTLP ARVQLIRSPA LAGNEVVWVD DPVEAAFLQI QGSGQVQLEE GGIMRLGVGG TNNQPFRSFA RWLLDQGEIT PVQATMQGIK AWARANPGRV DEMLNINPRY VFFNENPGNS DGPIGKLGVP LTAERSIAVD PGYIPLGAPV FLSTTKPLST EPIQKLVFAQ DVGSAIRGAV RADYYFGHGD AAGDLAGRMK QAGRLWVLVP KGSPVGVASR
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