Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2872 |
Symbol | paaF |
ID | 1221725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3101636 |
End bp | 3102412 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239279 |
Product | enoyl-CoA hydratase |
Protein accession | NP_520993 |
Protein GI | 17547591 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000338858 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTACC AACACATTCT GGTCGAAACG CGCGGTCGTG TCGGCCTTGT CACGCTCAAC CGCCCCAAGG CGCTCAACGC GCTCAACGAT GCGCTGATGG ACGAACTCGG CGCCGCGCTG CTCGCCTTCG ATGCCGACGA GGGCATCGGC GCCATGATCA TCACCGGTAG CGACAAGGCG TTTGCAGCTG GTGCGGACAT CGGCGCCATG GCCGACTACG ACTTCGCCAC CGTCTATAAG AATGAATACA TCACGCGCAA CTGGGAAACC ATCCGGCGCA TCCGCAAGCC GGTGATCGCC GCCGTGGCGG GCTACGCGCT GGGCGGCGGC TGCGAGTTGG CGATGATGTG CGACATCATC CTGGCGGCGG ACACCGCCAG GTTCGGCCAG CCGGAGATCA AACTCGGCAC CATGCCGGGC GCGGGCGGCA CCCAGCGCCT GCCACGCGCC GTCTCCAAGG CCAAGGCCAT GGACCTCTGC CTGACCGCGC GCATGATGGG CGCCGATGAA GCTGAGCGCG CCGGCTTGGT TTCACGCGTT ATCCCCGCCG ACAAGCTCCT GGATGAAGCC TTGGCGGCCG CCGAGACCAT CGCCGGCTTC TCCCTGCCGA CCGCCATGAT GATCAAGGAG TCGATCAATG CGGCATACGA AACCACGCTG AGCGAGGGCG TGCGCCTGGA GCGCCGCCTG TTCCACGCCA CATTTGCCAC GGAAGACCAG AAAGAGGGCA TGCACGCTTT CCTGGGGAAG CGGCAACCTG CTTTCAAACA CCGCTAA
|
Protein sequence | MSYQHILVET RGRVGLVTLN RPKALNALND ALMDELGAAL LAFDADEGIG AMIITGSDKA FAAGADIGAM ADYDFATVYK NEYITRNWET IRRIRKPVIA AVAGYALGGG CELAMMCDII LAADTARFGQ PEIKLGTMPG AGGTQRLPRA VSKAKAMDLC LTARMMGADE AERAGLVSRV IPADKLLDEA LAAAETIAGF SLPTAMMIKE SINAAYETTL SEGVRLERRL FHATFATEDQ KEGMHAFLGK RQPAFKHR
|
| |