Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2857 |
Symbol | fadD1 |
ID | 1221705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3075262 |
End bp | 3076971 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239259 |
Product | Long-chain-fatty-acid--CoA ligase |
Protein accession | NP_520978 |
Protein GI | 17547576 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAAC CGTGGCTGAA GCACTATCCC CCCGGGGTCC CCGCCGAGAT CGACGCGTCG CAGTACCGAT CCCTGGCGCA TCTGCTTGAA GATTCCTTCC AGAAGAACCG TGACCACCGC GCCCTCGAGT GCATGGGCAA GGTGCTGACC TACGGCGAAG TCGATGCGCT GTCGCGCCAG TTGGCGGCGT GGCTGCAGTC CCGGGGCCTG GTGCCCGGCG CGCGTGTCGC GCTGATGATG CCCAACGTGC TGCAGTATCC GGTGGCGCTG GCCGCCGTGC TGCGCGCCGG CTACGTGGTC GTCAACGTCA ACCCGCTCTA CACCCCGCGC GAACTGGAGC ACCAGCTCAA GGACAGCGGC GCGGAAGCCA TCGTCATCCT GGAGAACTTC GCGACCACGC TGCAGCAGGT GCTGCCGAAC ACGCCGGTCA AGCACATCGT CGTGGCCAGC ATGGGCGACC TGCTGGGCGG GCTGAAGGGC ATGCTGGTCA ATTTCGTCGT GCGCAGCGTC AAGAAGATGG TGCCGGCGTG GGAACTGCCC AACTGCATCC GCTTCAACAC CGCGCTGGAG GCGGGCGCCA GGCTGGCGCT CAAGCCCACC GCGGTCGGCC CCGACGATAT CGCCTTCCTG CAATACACCG GCGGTACCAC CGGCGTCTCC AAAGGCGCGA CGCTGCTGCA CCGGAACATC GTCGCCAATG TGCTGCAGTC GGAGGCGTGG ATGCAGCCGG GGCTCGACAA GCCGGCTCAC GACGGCAGCC GGCTGGCGCC CGGCGATGAG GTCGTCACCA TCACCGCGCT GCCGCTGTAT CACATCTTCG CGCTGACGGT GTGCTGCCTG CTGTCGATGC GCAAGGGCGG CCTGGCGGTG CTGATCCCCA ACCCGCGCGA CATCCCGGGC TTCATCAAGG TGCTCAAGCG GTACCGCTTC CACATGTTCC CGGCGGTCAA CACGCTGTAC AACGCGCTGC TCAACCATCC CGAGTTCGCC AGCGTGGACT GCTCGCGCCT GCGCGTGGCC AACGGCGGCG GCATGGCGGT GCAGGAAGCG GTGGCCAAGA AGTGGCTCGA GGTGACCGGC TGCCCGATCA TCGAAGGCTA CGGGCTGTCC GAAACCTCGC CTTCGGCCAC CTGCAACCCG ACCGATACCG ATGTCTTCTC GGGCACGATC GGGGTGCCGC TGCCGTCCAC CGAGATCGCC ATCCGCGACG ACGAAGGTCG CGACCAGCCC ATCGGCACGC CCGGCGAGAT CTGCCTTCGC GGTCCGCAGG TCATGGCCGG CTACTGGAAG CGTCCCGACG AGACCGCCAA GGTCATGTAC GCCGACGGCT TCTTCAAGAC CGGCGACGTG GGCGTGATGG ACGCGCGCGG CTACACCAAG ATCGTCGACC GCAAGAAGGA CATGATCCTG GTGTCCGGCT TCAACGTGTA CCCGAACGAG ATCGAGGGCG TGGTGGCGAT GTGCCCCGGC GTGCTGGAAG TCGCGGCCGT GGGCGTGCCC GACGTGCACT CGGGCGAGGT GGTCAAGCTG TTCGTGGTGC GCCGAGACCC GTCGCTCACC GAGGAGAGGC TGCTGGCGTT CTGCAAGGAG CAGCTCACCG GCTACAAGCG TCCCAAGTTC ATCGAGTTCC GCAACGAGCT GCCGAAGACC AACGTCGGCA AGATTCTGCG CCGCGAACTG CGCGACGAGG CGATGAAGAA GCGCGCGTAA
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Protein sequence | MEKPWLKHYP PGVPAEIDAS QYRSLAHLLE DSFQKNRDHR ALECMGKVLT YGEVDALSRQ LAAWLQSRGL VPGARVALMM PNVLQYPVAL AAVLRAGYVV VNVNPLYTPR ELEHQLKDSG AEAIVILENF ATTLQQVLPN TPVKHIVVAS MGDLLGGLKG MLVNFVVRSV KKMVPAWELP NCIRFNTALE AGARLALKPT AVGPDDIAFL QYTGGTTGVS KGATLLHRNI VANVLQSEAW MQPGLDKPAH DGSRLAPGDE VVTITALPLY HIFALTVCCL LSMRKGGLAV LIPNPRDIPG FIKVLKRYRF HMFPAVNTLY NALLNHPEFA SVDCSRLRVA NGGGMAVQEA VAKKWLEVTG CPIIEGYGLS ETSPSATCNP TDTDVFSGTI GVPLPSTEIA IRDDEGRDQP IGTPGEICLR GPQVMAGYWK RPDETAKVMY ADGFFKTGDV GVMDARGYTK IVDRKKDMIL VSGFNVYPNE IEGVVAMCPG VLEVAAVGVP DVHSGEVVKL FVVRRDPSLT EERLLAFCKE QLTGYKRPKF IEFRNELPKT NVGKILRREL RDEAMKKRA
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