| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2848 |
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| Symbol | murF |
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| ID | 1221696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3064565 |
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| End bp | 3066013 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239250 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase protein |
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| Protein accession | NP_520969 |
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| Protein GI | 17547567 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG CACTGCCCGT GATGATGCAC GCCACCGATG CCGCCGCCTG GATGGCCGGC
GCGCACCTGG TCGGCCCGGA CGCCGCCATC CGCCGCGTCA CCACCGACAG CCGCGCCGTG
CTGCCCGGCG ACCTGTTCGT CGCGCTGATC GGCGAGCGCT TCGACGCGCA CGATTTTCTG
CCGGATGTGG TGGCGCGCGG GGCCGCGGCA GTGCTGGTCT CGCGCCCGCC GGTCGGCATC
CCCGACCTGT CCGGCGTGGC GGTGCTGACC GTTGCCGATA CGCGCATCGC GCTGGGCCAG
CTGGCCGCCG GCTGGCGCCG CCGGTTCCCG ATCCCGGTGG TGGCGGTGAC GGGCAGCAAC
GGCAAGACCA CGGTCAAGGA AATGATCTCG GCCGTCTTCG CGTGTGCCGT CGGTGAAGCG
GCCCGCCTGG CGACGGCCGG CAACCTCAAC AACGACATCG GCCTGCCGCT GACGCTGTTC
CGCCTGACCG CGCAGCACCG GCTGGCCGTG CTCGAGCTGG GCATGAACCA TCCCGGCGAA
ACCGAGGTGC TGGCCGCCAT CGCCCAGCCC ACCGTGGCGC TGATCAACAA CGCACAGCGC
GAGCACCAGG AGTTCATGGT CAGCGTGGAA GCCGTGGCGG CCGAGCACGC CGCGGTGCTG
GCCGCGCTGC CGGCCGACGG CGTGGCGGTT TTTCCGCGCG ATGCGGCCAA TGGCGGCGAA
TACGCGCCGC TGTGGCGCGC AGCGGCGGGT ACGCGGCGTG TGCTGGATTT CGGCATCGAA
GGCGGTGCGG TGTCGGCTGC CGTGACGGAC ACGGCCGACG GCCAGCGGAT CGACGTGCAC
GCGCCAGGCC TGCGCTTTTC CTTCACGCTG CCGTTACTTG GTGTGCACAA CGCGCGCAAC
GCGCTGGCGG CGACGGCCTG CGCGCTGGCC GCCGGCATCG CGCCCGAGGT GATCGCACAG
GCGCTGTCGG CGTTCGCGCC GGTCAAGGGG CGCCTGCAGC GCAAGCCGGG CCATCATGGC
GGGCTGGTGA TCGACGACAC CTACAACGCG AACCCCGACT CCGTGCGCGC CGCCATCGAT
GCGTTGGCGA CGCTGCCGGC GCCGCGCTGG CTGGTGCTGG GCGACATGGG CGAAGTGGGC
ACGCAGGGGC CGGCCTTCCA TCGGGAGATC GGCGCGTACG CCCGCGAGCG CGGCATCGAC
GCGGTCCTGG CCACCGGTGA GCTGGCGCGC CATATGGTGG AGGCTTTCGG TGGCGGCGCG
CGGCATTTCG CGTCGGCCGA GGCCCTGATC GAGCAGGGCG TGCCGGCCAT TGCGCCGGGC
GCGACGGTTC TGGTGAAGGG CTCGCGCTTC ATGCGGATGG AACGCATTGT CGATGCGCTG
GTCTTGAAAG ACCCGGCAGC CGACTCGCAA GGGGCGCCGG GGACGACGCA CACACAACAG
ACGCACTAA
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| Protein sequence | MSDALPVMMH ATDAAAWMAG AHLVGPDAAI RRVTTDSRAV LPGDLFVALI GERFDAHDFL
PDVVARGAAA VLVSRPPVGI PDLSGVAVLT VADTRIALGQ LAAGWRRRFP IPVVAVTGSN
GKTTVKEMIS AVFACAVGEA ARLATAGNLN NDIGLPLTLF RLTAQHRLAV LELGMNHPGE
TEVLAAIAQP TVALINNAQR EHQEFMVSVE AVAAEHAAVL AALPADGVAV FPRDAANGGE
YAPLWRAAAG TRRVLDFGIE GGAVSAAVTD TADGQRIDVH APGLRFSFTL PLLGVHNARN
ALAATACALA AGIAPEVIAQ ALSAFAPVKG RLQRKPGHHG GLVIDDTYNA NPDSVRAAID
ALATLPAPRW LVLGDMGEVG TQGPAFHREI GAYARERGID AVLATGELAR HMVEAFGGGA
RHFASAEALI EQGVPAIAPG ATVLVKGSRF MRMERIVDAL VLKDPAADSQ GAPGTTHTQQ
TH
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