Gene RSc2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2847 
SymbolmraY 
ID1221695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3063381 
End bp3064550 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID637239249 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionNP_520968 
Protein GI17547566 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTGG CATTGGCGCA GTGGCTGCAG AACGACTTCG GCTTCCTGCG CGTCTTCAAC 
TATCTGACGT TCCGGGCCGT GATGGCATCC CTCACGGCGC TGGTGATCGG CCTCGGCTTC
GGGCCATGGG TGATCCGTCG CCTGACCGAG CTCAAGGTCG GCCAGGCCGT GCGCAGCTAT
GGCCCGCAGA CCCACCTAGT CAAGGCCGGC ACACCCACCA TGGGCGGCGT GCTGGTGCTG
ATCGGCATTG CCGTCTCCAC GCTGCTGTGG TGCGACTGGG GCAACCGCTT CATCTGGATC
GTGCTGCTGG TCACACTCGG CTATGGGACG ATCGGCTGGG TGGACGACTA CCGCAAGGTG
GTCCACCGCG ACCCGAAGGG CATGTCCTCG CGCGAGAAGT TCTTCTGGCA GACGGTGATC
GGCCTGTTCG CCGCCGCCTA TCTGGCGTTC TCCGTGTCCG AGACCAGCAA CATGCGCGTG
CTGGAGCTGT TCCTGGACTG GGTGCGCAGT GGCCTGTCGC TGAGCCTGCC AGCCAAGTCG
CACCTGATCG TGCCGTTCTT CAAGGAGCTC AGTTATCCGC TGGGCGTGTT CGGCTTCATC
GTGCTGACCT ACCTCGTCAT CGTCGGCTCC AGCAACGCGG TGAACCTGAC CGACGGCCTG
GACGGCCTGG TCATCATGCC GGTGGTGCTG GTGGGCAGCG CACTGGGCAT CTTCGCCTAT
GTGATGGGCA GCGCGGTCTA CAGCAAGTAC CTGCTGTTCC CGCACATCCC GGGCGCGGGC
GAACTGCTGA TTTTCTGCTC GGCGATGGCC GGTGCCGGCC TGGCCTTCCT GTGGTTCAAC
GCCCATCCGG CCCAGGTGTT CATGGGCGAC GTCGGCGCGC TGGCGCTGGG CGGGGCGCTC
GGCACCGTCG CGGTGATCGT GCGGCAGGAG ATCGTGCTGT TCATCATGGG CGGCGTGTTC
GTGGCCGAAA CCATTTCGGT GATGCTGCAG GTGACCTGGT TCAAGTTCAC CAAGCGGCGC
TACGGCGAGG GCCGGCGGCT GTTCCGCATG GCCCCGCTGC ACCACCATTT CGAGCTGTCC
GGCTGGAAGG AAACGCAGGT CGTCGTGCGT TTCTGGATCA TCACCATGAT GCTGGTGCTG
ATCGGCCTGT CGACGCTGAA GCTGCGGTGA
 
Protein sequence
MLLALAQWLQ NDFGFLRVFN YLTFRAVMAS LTALVIGLGF GPWVIRRLTE LKVGQAVRSY 
GPQTHLVKAG TPTMGGVLVL IGIAVSTLLW CDWGNRFIWI VLLVTLGYGT IGWVDDYRKV
VHRDPKGMSS REKFFWQTVI GLFAAAYLAF SVSETSNMRV LELFLDWVRS GLSLSLPAKS
HLIVPFFKEL SYPLGVFGFI VLTYLVIVGS SNAVNLTDGL DGLVIMPVVL VGSALGIFAY
VMGSAVYSKY LLFPHIPGAG ELLIFCSAMA GAGLAFLWFN AHPAQVFMGD VGALALGGAL
GTVAVIVRQE IVLFIMGGVF VAETISVMLQ VTWFKFTKRR YGEGRRLFRM APLHHHFELS
GWKETQVVVR FWIITMMLVL IGLSTLKLR