| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2842 |
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| Symbol | ddl |
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| ID | 1221690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3056943 |
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| End bp | 3057938 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239244 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | NP_520963 |
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| Protein GI | 17547561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG GTCCGTTCGT CCCCCATCCG ACGCTCGATC CGAAGTCCCT CGGCAAGGTG
GGCGTGATCC TCGGCGGTCG CTCGGCCGAG CGCGAGATCT CGCTGCTGTC GGGCAACGGC
GTGCTGGCGG CGCTGCGCTC GCGCGGCGTC GACGCGCATC CGTTCGACCC GGGCACGCAG
CCGGTGGCCG GGCTCGCCGC GCAGGGCTTC CACCGCGTGG TGATCTCGCT GCACGGCCGC
TTCGGCGAGG ACGGCACGAT CCAGGGGCTG CTCGAGCAGT TCGGCATTCC CTACACCGGC
AGCGGCGTAC TCGCGTCTGC GCTGGCGATG GACAAGGAAG CCACCAAGCG CTTGTGGCAG
ACGCACAGCC TGCCGACCCC CGATTTCGTG ATGCTGCACG CCGGCGCCGA CTGGCAGGCC
GTTGCCGACC GCCTGGGCCT GCCGCTGATC GTCAAGCCGG CGCGCGAGGG CTCGTCGATC
GGCCTGACCA AGGTGACCAG CGTGGCCGAA TTGCCCGCCG CCTACGAAAA GGCCGCGCGC
CTGGACCGCG ACGTGATGGC CGAACAGTTC ATCGACGGCG ACGAGCTGAC CTGCGCCGTG
ATCGGCGAAG GCGAGCACGC GACGGCGCTG CCGCTGATCC GCATCGTCGC GCCGCAGGCC
AACTACGACT ACCAGCACAA GTACTTCACC GACGACACGC GCTACGAGTG CCCCGCGCCG
ATTCCCGCCG AAGCGGCGGC GCGCGTGCAG GCGCTGGTGG TGCAGGCGTA TCGCAGCCTG
GGCTGCCGCG GCTGGGGCCG CGCCGACATC ATGCTGCGCA AGCACGATGG CGCGCCGTTC
CTGCTCGAGA TGAACACCTC GCCGGGCATG ACCGGGCATT CGCTGGTGCC GATGGCCGCG
CGCGCGGTGG GCATCAGCTA TGAAGATTTC GTGCTGCAGC TGGCGGCGAC CGCGTCGCTT
GAGCTGCGCG CGAGCCACGA CTGGAAACCG GAATAA
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| Protein sequence | MTTGPFVPHP TLDPKSLGKV GVILGGRSAE REISLLSGNG VLAALRSRGV DAHPFDPGTQ
PVAGLAAQGF HRVVISLHGR FGEDGTIQGL LEQFGIPYTG SGVLASALAM DKEATKRLWQ
THSLPTPDFV MLHAGADWQA VADRLGLPLI VKPAREGSSI GLTKVTSVAE LPAAYEKAAR
LDRDVMAEQF IDGDELTCAV IGEGEHATAL PLIRIVAPQA NYDYQHKYFT DDTRYECPAP
IPAEAAARVQ ALVVQAYRSL GCRGWGRADI MLRKHDGAPF LLEMNTSPGM TGHSLVPMAA
RAVGISYEDF VLQLAATASL ELRASHDWKP E
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