| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2837 |
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| Symbol | lpxC |
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| ID | 1221685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3051455 |
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| End bp | 3052372 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637239239 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | NP_520958 |
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| Protein GI | 17547556 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.070972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAC AACGCACCAT CAAGTCCGTG GTCAAGACCG TCGGCATCGG GTTGCACTCG
GGCCGCAAGG TGACGTTGAC GTTGCGTCCG GCGGCTCCCG GCAACGGCAT CATCTTCACG
CGCGTGGACC TGGATCCGGC CGTCGAGATT CCCGCCACCG CCAGCGCTAT CGGCGACACC
CGCCTGGCCT CCGTGCTGCA GAAAGATGGC GCTCGGGTGT CCACGGTCGA GCACCTGATG
TCCGCTTGCG CGGGGCTCGG CATCGACAAC CTGTATGTCG ATGTCGACGC TGAGGAAATC
CCCATCATGG ACGGCAGCGC GGCCTCGTTC GTGTTTCTGC TGCAGTCGGC CGGTATCGAG
GAGCAGGGCG CGGCCAAGCG CTTCATCCGC GTGATCAAGC CGGTGGAAGT GCGCGACGGC
GACAAGCTGG CGCGGCTCGA GCCTTATTTC GGATTCAAGC TGTCGTTCAC CATCGAATTC
CGTCATCCGG CGGTCGACAA GACGGGGCAG ACGTTCGAGA TCGATTTCGC CGACACCAGC
TACACCCGCG AGATCGCCCG TGCGCGCACC TTCGGCTTTG CCCACGAGGT CGAGATGCTG
CGGGAGATCG GGCTGGCGCG CGGCGGCAGC CTGGACAACG CCATCGTGCT CGATGAGCAC
CGCATGCTGA ACAACGACGA GCTGCGCTAT GGCGATGAGT TCGTCCGCCA CAAGATCCTG
GATGCGATCG GCGACCTGTA CGTGGTCGGC TACCCGCTGA TCGCGGCCTA TACGGCGCAC
AAGTCCGGCC ATGGCCTGAA CAATGCGTTG CTGCGCGCGC TGCTGGCCGA TGAGGCGGCG
TACGAAATCG TCACGTTCGA CAAGGTGGAA GAGGCGCCGC GCGCCTTCCT GCCGCAGTTG
CAGCCGGCAT TCTCCTGA
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| Protein sequence | MLKQRTIKSV VKTVGIGLHS GRKVTLTLRP AAPGNGIIFT RVDLDPAVEI PATASAIGDT
RLASVLQKDG ARVSTVEHLM SACAGLGIDN LYVDVDAEEI PIMDGSAASF VFLLQSAGIE
EQGAAKRFIR VIKPVEVRDG DKLARLEPYF GFKLSFTIEF RHPAVDKTGQ TFEIDFADTS
YTREIARART FGFAHEVEML REIGLARGGS LDNAIVLDEH RMLNNDELRY GDEFVRHKIL
DAIGDLYVVG YPLIAAYTAH KSGHGLNNAL LRALLADEAA YEIVTFDKVE EAPRAFLPQL
QPAFS
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