| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2834 |
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| Symbol | secA |
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| ID | 1221682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3046832 |
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| End bp | 3049636 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239236 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | NP_520955 |
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| Protein GI | 17547553 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.745089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG GCCTTCTCAA GAAGATTTTC GGCAGCCGCA ACGAACGGCT GATCAAACAG
TACCGCCGCA AGGTGGTGCA GATCAACGCG CTCGAACCCA CGTTCGAGGC GCTTTCCGAT
GCCGAACTGC AGGCCAAGAC CCAGGCATTC CGCGAGCGCT TCGCCAAGGG CGAGACCCTC
GACGCGCTGC TGCCCGAAGC ATTCGCCGTG TGTCGCGAAG CCAGCAAGCG CGTGATGAAG
ATGCGCCATT TCGACGTGCA GCTGATCGGC GGCATGGTGC TGCACGATGG CAAGATCGCC
GAAATGCGCA CTGGCGAAGG CAAGACGCTG ACCGCCACGC TGGCGGTCTA CCTGAATGCG
ATCGCCGGGC TGGGCGTGCA CGTGGTGACG GTCAACGACT ACCTGGCCCA GCGCGATGCC
GAATGGATGG GCAAGCTCTA CAACTGGCTG GGCCTGTCGG TCGGGGTCAA CCTGACCACC
ATGGCCCACG ATGAGAAGCA AGCCGCCTAC GCTGCCGACA TCACCTACGG TACCAACAAC
GAGTTCGGCT TCGACTACCT GCGCGACAAC ATGGTGTACG ACGACAGCCA GCGCGTGCAG
CGTCCGCTGA ACTACGCCAT CGTCGACGAG GTGGACTCGA TCCTGATCGA TGAAGCCCGC
ACGCCGCTGA TCATCTCCGG CCAGGCCGAG GACCACACCG ACCTGTATCG CCGCATGAAC
AGCATCCCGC CGCTGCTCAC GCGCCAGATC GGCGAAGAGA AGGCCGACGG CACCGGCGTC
GAGAAGCCGG GCGACTACTA CGTCGATGAA AAATCCCACC AGGTCTACCT GACCGAAGCG
GGGCACGAGA AGGCGGAGCA GATCCTGCTG CAGGCGGGCC TGCTGGCCGA GGGCGAATCG
CTGTACGCGC CGCAGAACAT CACGCTGATG CACCACCTGT ACGCCTCCCT GCGCGCGCAC
AGCCTGTTCC ACCGCGACCA GCACTACGTG GTGCAGGGCG ACGAGGTGAT CATCGTCGAC
GAATTCACCG GCCGCCTGAT GCAGGGCCGC CGCTGGTCCG ACGGCCTGCA CCAGGCCGTG
GAGGCCAAGG AAGGCGTGCA GATCCAGCAG GAAAACCAGA CGCTGGCGAC CATCACCTTC
CAGAACTACT TCCGCATGTA CGCCAAGCTG GCGGGCATGA CCGGCACGGC CGATACCGAA
GCCTACGAGT TCCAGGAGAT CTACGGCCTG GAGACGGTGG TGATCCCGAC CAACCGGCAG
GCCCAGCGCA AGGACCTGCA GGACCAGATC TACAAGACCT CGAAGGAGCG CTACGACGCC
GTCATCCGCG ATATCCGCGA CTGCTTCGAG CGCGGCCAGC CGGTGCTGGT GGGCACGACT
TCCATCGAGA ACTCCGAGCT GCTGTCGCAC CTGCTGAACC AGGCCCAGCT GCCGCACCAG
GTGCTCAACG CCAAGCAGCA CGCGCGCGAG GCCGAGATCG TCGCGCAGGC CGGCCGGCCC
AAGATGGTCA CCATCGCCAC CAACATGGCG GGCCGTGGTA CCGACATCGT GCTGGGCGGC
AATGTGGAAA AGCAGGCCGG CTTCGTGATG GCCGACGAAT CCCTGTCGGA CGAAGAGAAG
GCCAGGCGCG TCACGCAACT GCAGGACGAG TGGCAGTCGC TGCACGAGCA GGTCAAGGCC
GCGGGCGGTC TGCATATCGT CGGCACCGAG CGCCATGAGT CGCGCCGGAT CGACAACCAG
CTGCGCGGCC GCGCCGGCCG CCAGGGCGAT CCGGGCTCGT CGCGCTTCTA CCTGTCGCTC
GACGATCAGC TGCTGCGCAT CTTCGCCGGC GATCGCGTGC GCGCCATCAT GGACCGCCTG
AAGATGCCGG AAGGCGAGCC GATCGAGGCG GGCATCGTCA CGCGCTCGAT CGAGTCCGCG
CAGCGCAAGG TCGAGGGCCG CAACTTCGAC ATTCGCAAGC AACTGCTGCA GTACGACGAC
GTGGCCAACG ACCAGCGCCG CGAGATCTAC AAGCTGCGCA ACGAAATTCT CGAAGCCGTC
GACGCGGGCG ATCTGGTCAA GAACCTGCGC GAATCCGTGT TCGTCGAGCT GTTCCGCGCC
TACGTGCCGG CCGAGTCCAT GGAAGAGCAG TGGGATCTCG CCGGCCTGGA GAAGACGCTG
CGTGACGACT GGGGCGTCGA GGTGCCGCTG GTGAAGACGG TGGAGCAGGC GCAGTCGATC
GAGGACGAAG AGCTGCTGAC GCAGGTGCAG GAGGCCGTCG AGGCTGTGTA TGCGGGCAAG
GTGGCGCAGG TCGGCCGCGA GTCCTTTGCC GGCTTCGAGC GTTCGGTGAT GCTGCAGAGC
CTGGACACGC ACTGGCGCGA GCATCTGGCG GCGCTGGACC ACCTGCGCCA GGGCATCCAC
CTGCGCGGCT ATGCGCAGAA GGACCCGAAG CAGGAATACA AGCGTGAGTC GTTCGAGCTG
TTCGGCCGCC TGCTGGACAA CATCCGCAAC GAAGTGACGC GCATCATCTT CACGGTGCGC
ATCCAGTCGC AGGCGGAGCT GGAAGAGGCT TCCGAGCAGA TCGAGGAAGA CCTGTCCCAG
CTGACCAACG TGCAGTACAA GCACGACGAA TTCAGCGAAC TGGCCGAAGT CGCCGCGGGC
GATGCCGAGA TCCACGGCGA GACGCCGCCC GTGCCGGCCC ATCGGTCGGC CGCGGCTTCC
GCCGCTGCGG CACTGGCGGG GCAGGTGCCC AAGGTCGGCC GCAACGACCC GTGCCCATGC
GGTTCGGGCA AGAAGTACAA GCAGTGTCAC GGCAAGCTGG CCTGA
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| Protein sequence | MITGLLKKIF GSRNERLIKQ YRRKVVQINA LEPTFEALSD AELQAKTQAF RERFAKGETL
DALLPEAFAV CREASKRVMK MRHFDVQLIG GMVLHDGKIA EMRTGEGKTL TATLAVYLNA
IAGLGVHVVT VNDYLAQRDA EWMGKLYNWL GLSVGVNLTT MAHDEKQAAY AADITYGTNN
EFGFDYLRDN MVYDDSQRVQ RPLNYAIVDE VDSILIDEAR TPLIISGQAE DHTDLYRRMN
SIPPLLTRQI GEEKADGTGV EKPGDYYVDE KSHQVYLTEA GHEKAEQILL QAGLLAEGES
LYAPQNITLM HHLYASLRAH SLFHRDQHYV VQGDEVIIVD EFTGRLMQGR RWSDGLHQAV
EAKEGVQIQQ ENQTLATITF QNYFRMYAKL AGMTGTADTE AYEFQEIYGL ETVVIPTNRQ
AQRKDLQDQI YKTSKERYDA VIRDIRDCFE RGQPVLVGTT SIENSELLSH LLNQAQLPHQ
VLNAKQHARE AEIVAQAGRP KMVTIATNMA GRGTDIVLGG NVEKQAGFVM ADESLSDEEK
ARRVTQLQDE WQSLHEQVKA AGGLHIVGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL
DDQLLRIFAG DRVRAIMDRL KMPEGEPIEA GIVTRSIESA QRKVEGRNFD IRKQLLQYDD
VANDQRREIY KLRNEILEAV DAGDLVKNLR ESVFVELFRA YVPAESMEEQ WDLAGLEKTL
RDDWGVEVPL VKTVEQAQSI EDEELLTQVQ EAVEAVYAGK VAQVGRESFA GFERSVMLQS
LDTHWREHLA ALDHLRQGIH LRGYAQKDPK QEYKRESFEL FGRLLDNIRN EVTRIIFTVR
IQSQAELEEA SEQIEEDLSQ LTNVQYKHDE FSELAEVAAG DAEIHGETPP VPAHRSAAAS
AAAALAGQVP KVGRNDPCPC GSGKKYKQCH GKLA
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