Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2829 |
Symbol | |
ID | 1221677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3043186 |
End bp | 3043944 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637239231 |
Product | hypothetical protein |
Protein accession | NP_520950 |
Protein GI | 17547548 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0324685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.149552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTCTGT ACGAATACCC CTTCAACGAA CGCATTCGGA CGCTGCTGCG CCTCGAAGAC CTGTTCGAGC GGCTGGATTT CTTTCTCACG CAGGAACACC CGCTGCAGCA CCATGTGGCG CTGACCACGC TGTTCGAGAT CGTGGACGTG GCCGGCCGCG CCGACCTCAA GTCCGACCTG CTCAAGGAAC TGGACCGTCA GCGCCAGACG CTGACCGTGC TGCGCAGCAA TCCGCAGATC GACCAGGAAG CGCTCGACGC CGTGATCGCC GAACTGGAAA CGGCGTCCGG TAACCTCACC GCCACACACG GCAAGGCCGG CCAGCTGATC GCCGACAACG AATGGCTGAC CAGCATCCGC AGCCGCGCCA TCATCCCGGG CGGGACATGC GAGTTCGACC TGCCGGCGTA TTTTGCATGG CAGCATCATC CCGGCGAGCG CCGCCGTGCC GACATCGTCA AATGGGCGCA GCCGCTCGTA CCGCTGCGCG ACGCCACGAT GATCGTGCTG CGCCTGCTGC GCGAATCCGG CCAGAGCGGC AAGGTGATCG CCAATGCCGG CAGCTACCAG CAGATGCTAT CCGGCCGGAT CTATCAACTG ATGCAAGTGC GCCTGGACGA TGTCGCGCTG GGCTTCATCC CCGAGATCAG TGCCAACAAG TACATGCTCT GGGTGCGCTT CACCCAGCAG GATGGCGATC TGCGGCCCAA GCCGGTCGAT GCGGACATCC CGTTCCAGCT CAAGCTCTGC AACTTCTGA
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Protein sequence | MILYEYPFNE RIRTLLRLED LFERLDFFLT QEHPLQHHVA LTTLFEIVDV AGRADLKSDL LKELDRQRQT LTVLRSNPQI DQEALDAVIA ELETASGNLT ATHGKAGQLI ADNEWLTSIR SRAIIPGGTC EFDLPAYFAW QHHPGERRRA DIVKWAQPLV PLRDATMIVL RLLRESGQSG KVIANAGSYQ QMLSGRIYQL MQVRLDDVAL GFIPEISANK YMLWVRFTQQ DGDLRPKPVD ADIPFQLKLC NF
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