| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2823 |
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| Symbol | ispB |
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| ID | 1221670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3035739 |
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| End bp | 3036707 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239224 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | NP_520944 |
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| Protein GI | 17547542 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000462084 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.156809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT CCGTCCTGCT CGCCCCCGTC GCCGAAGACA TGCACGCCGT CGATGCCGTG
ATCCGGCGCC GACTCGGCTC GGAGGTCGCA CTGATCAACC AGATCGGCGA ATACATCATC
AGCGCGGGAG GCAAACGCCT GCGTCCGGTG ATCCTGCTGC TGATGGCAAA CGCACTGGGC
TATCGCGGCC AGCACCATTA CGAACTGGCG GCGGTGGTCG AGTTCATCCA TACCGCCACG
CTCCTGCACG ACGACGTGGT CGACGAATCC GAGCTGCGCC GCGGCCGCCA GACCGCCAAC
GCGGTGTTCG GCAACGCAGC CAGCGTGCTG GTGGGCGACT TCCTCTACTC GCGCGCCTTC
CAGATGATGG TGCAGGCCGA CAGCATGCGC GTCATGCAGA TCCTGGCCGA TGCCACCAAC
GTCATCTCCG AAGGCGAGGT GCTGCAACTG CTCAACATGC ACGACCCGGA CGTGACGGAG
GAGCGCTACC TGCAGGTGAT CCGCTACAAG ACCGCCAAGC TGTTCGAGGC CGCGGCGCAG
ATCGGAGCCG TGCTCTCGGG CGCCGACGCC GCCACCGAAG CCGCCGCCGC CGAATACGGC
CGGCGCATCG GGACCGCGTT CCAGATCGTC GACGACCTGC TCGACTACAC CGCGACCGCC
GACCAGATGG GCAAGAACGC CGGCGACGAC CTGCGCGAAG GCAAACCGAC CCTGCCGCTG
ATCTATCTGC TGTCGCACGG CACCGAGACG CAGCGCGCGC TGGCGCGCCA GGCCATCGAA
CAGGGCGGCA CCGAGCACTT CGATGCCATC TTCGCCGCCA TCCAGGCATC GGGCGCGCTC
GAGTACACGC GCAAGGCCGC CGAGCACGAG GCTTCCGCAG CCGCGGAAGC AATAATTGCA
TTACCCCCTT CCCAATTCCG CCAAACGCTG ATAGAGTTAT GTGCTTTCTC GCTGCAACGT
CAGTCCTGA
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| Protein sequence | MPASVLLAPV AEDMHAVDAV IRRRLGSEVA LINQIGEYII SAGGKRLRPV ILLLMANALG
YRGQHHYELA AVVEFIHTAT LLHDDVVDES ELRRGRQTAN AVFGNAASVL VGDFLYSRAF
QMMVQADSMR VMQILADATN VISEGEVLQL LNMHDPDVTE ERYLQVIRYK TAKLFEAAAQ
IGAVLSGADA ATEAAAAEYG RRIGTAFQIV DDLLDYTATA DQMGKNAGDD LREGKPTLPL
IYLLSHGTET QRALARQAIE QGGTEHFDAI FAAIQASGAL EYTRKAAEHE ASAAAEAIIA
LPPSQFRQTL IELCAFSLQR QS
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