| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2812 |
|---|
| Symbol | hprT |
|---|
| ID | 1221659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 3026111 |
|---|
| End bp | 3026659 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637239213 |
|---|
| Product | hypoxanthine-guanine phosphoribosyltransferase |
|---|
| Protein accession | NP_520933 |
|---|
| Protein GI | 17547531 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.500056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.134526 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCG CAGAACAGGC CCGCGAACTG TGGGCCAACT CCGAGGAAAT CGTTAGCGAA
GCGGCCGTGC ACGCCTCGCT GGACCGCATG GCCGCCGAGA TCACCGAGAA GATCGGCGAC
ACCTTTCCGA TGGTGCTCTC CGTGATGGGC GGCGCCTGCG TCTTCACCGG CATGCTGCTG
CCCAAGCTGG CCTTCCCGCT GGAGTTCGAC TACATCCACC TGTCCCGCTA CAACAACAAG
ACGGTGGGCG GCGAGATGCA ATGGCGGGTG GCGCCGCGCG AGTCGGTCAA GGACCGCACC
GTGCTGGTGC TCGACGACAT CCTGGACGAA GGCGAGACCA TGGCCGCCAT CCGCTCGCGC
ATTATTGACA TGGGTGCGGC CGAATTCTAT TCCGCCGTGC TGTGCGAGAA GACACTCGCC
AAGGACAAAC CGCTGCACCC GGACTTCTGC GGCTTCCCGG TGCCGGACCG CTACGTATTC
GGCTGCGGCA TGGACGCCAA GGGCTACTGG CGCAACCTGC CGGCCATCCG GGCACTGCGC
AACAGCTGA
|
|---|
| Protein sequence | MLSAEQAREL WANSEEIVSE AAVHASLDRM AAEITEKIGD TFPMVLSVMG GACVFTGMLL
PKLAFPLEFD YIHLSRYNNK TVGGEMQWRV APRESVKDRT VLVLDDILDE GETMAAIRSR
IIDMGAAEFY SAVLCEKTLA KDKPLHPDFC GFPVPDRYVF GCGMDAKGYW RNLPAIRALR
NS
|
|---|
| |