Gene RSc2810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2810 
Symbol 
ID1221657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3023524 
End bp3024435 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID637239211 
Producthypothetical protein 
Protein accessionNP_520931 
Protein GI17547529 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.443588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.1588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATTG TACTGTATGC GCTGACAGCG CTTCTCTACG GGGCCCTCGC CTGGTACGCG 
TGGGCGCGTC GCGGCGGCCT CGAGGCCCAG GCAGCGGGTG CCCTGGTGTC CGGCGGCCAG
CCTTTGGCCG GCGCGGCCGT GCTGGTGCCG CCCCCGCCGC CGGCCGCCGA ATCCGGCCCC
GCCTGGTGGC GCTGGGCCCT GCTGGGTGCG CTGGCGGTGC ACGGGATGCT GCTGCACGAG
ACCATCTTCC CGGCCGCTTC CATGAAGTTC GGCTTCGCCT ATGCGCTGTC GTCCATGCTG
TGGCTCGGCG TCGGCATCTA CTGGATCGAG AGCCTGTTCT TCTCGCTGGC GGGCCTGGGC
CTGCTGGTGA TGCCGGTCGC GCTGGTCGGC AGCCTGCTGC CGCTGGCGTT CCCGGGCACG
CAGATCCTCG GCTATGCCGC CAGCCCGCTG TTCAAGCTGC ACTTCGCCAT CGCGAACGTG
GCCTACGGGC TGTTCACGCT GGCGGCCTTC CACGCCATCC TGATGCTGGC CGCCGAGCGC
CGCCTGCATA CCATCAACCG GCCGGCGGAA TCCGGCTGGC TCGGGCGCTG GCTGGATCTG
CTGCCGCCGC TGCTGACGCT GGAGAAGCTG CTGTTCCGTC TGATCGGCGC GGGGTTCGTG
CTGCTCACGC TGACGATCGC CTCGGGCATG CTGTTCTCCG AGCAGTTGTT TGGCCGGGCG
TTCCATGTCG ATCACAAGAC CGTCTTCGCC ATCCTGTCGT GGGCGATGTT CGGCGGCATC
CTGATCGGCC GCCGTTTCTA CGGCTGGCGC GGGCGCGTGG CGCTGCGCTG GGTGATGGCG
GCCTTTGCGA CGCTGATGCT GGCCTATGTC GGCAGCCGCT TCGTGCTGGA AGTCATCTTG
CATCGCGCAT AG
 
Protein sequence
MVIVLYALTA LLYGALAWYA WARRGGLEAQ AAGALVSGGQ PLAGAAVLVP PPPPAAESGP 
AWWRWALLGA LAVHGMLLHE TIFPAASMKF GFAYALSSML WLGVGIYWIE SLFFSLAGLG
LLVMPVALVG SLLPLAFPGT QILGYAASPL FKLHFAIANV AYGLFTLAAF HAILMLAAER
RLHTINRPAE SGWLGRWLDL LPPLLTLEKL LFRLIGAGFV LLTLTIASGM LFSEQLFGRA
FHVDHKTVFA ILSWAMFGGI LIGRRFYGWR GRVALRWVMA AFATLMLAYV GSRFVLEVIL
HRA