Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2801 |
Symbol | |
ID | 1221648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3011392 |
End bp | 3011868 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239202 |
Product | transcription regulator protein |
Protein accession | NP_520922 |
Protein GI | 17547520 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.031775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.480036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCG ACCGGCGCGA TATCCAGCTA CTGAACCTGA TGCAGGACGA TGCCACCCTG CCGCTGCGCG CGCTGGCCGA GCGCGTGCAC ATGTCGGTGG CGACCTGTCA GCGGCGCATT GCCCAGATGC GCGCGGAGGG CATCCTGCTG CGGCAGGTCG CGCTGGTGGA CCGGGTGCGC GTCGGCCGTC CGCTGACCGT GTTCGTGTGG GTGGAGCTGG ACCGCCAGCA CAGCGCCGCG CTGCGTGATT TCGAGCGCAA GATGAGCGCC GAGCCCGATG TGCTGGCGTG CTACGAGATC TCCGGCGAGG CGGATTTCCT GCTGTCGGTC AACGCCGCCT CTATGGAGGC TTACCACGCC TTCACGCGGC GCGTGTTCAT CGCCGACAAC AACGTGCGTG GCTTCAAGAG CAACTTCGTC ATGCACTGCG CGAAGTACGA AACCAAGATT CCCATCGCTG AGCCCGAGGC CGGCTGA
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Protein sequence | MQLDRRDIQL LNLMQDDATL PLRALAERVH MSVATCQRRI AQMRAEGILL RQVALVDRVR VGRPLTVFVW VELDRQHSAA LRDFERKMSA EPDVLACYEI SGEADFLLSV NAASMEAYHA FTRRVFIADN NVRGFKSNFV MHCAKYETKI PIAEPEAG
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