Gene RSc2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2801 
Symbol 
ID1221648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3011392 
End bp3011868 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID637239202 
Producttranscription regulator protein 
Protein accessionNP_520922 
Protein GI17547520 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.031775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.480036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCG ACCGGCGCGA TATCCAGCTA CTGAACCTGA TGCAGGACGA TGCCACCCTG 
CCGCTGCGCG CGCTGGCCGA GCGCGTGCAC ATGTCGGTGG CGACCTGTCA GCGGCGCATT
GCCCAGATGC GCGCGGAGGG CATCCTGCTG CGGCAGGTCG CGCTGGTGGA CCGGGTGCGC
GTCGGCCGTC CGCTGACCGT GTTCGTGTGG GTGGAGCTGG ACCGCCAGCA CAGCGCCGCG
CTGCGTGATT TCGAGCGCAA GATGAGCGCC GAGCCCGATG TGCTGGCGTG CTACGAGATC
TCCGGCGAGG CGGATTTCCT GCTGTCGGTC AACGCCGCCT CTATGGAGGC TTACCACGCC
TTCACGCGGC GCGTGTTCAT CGCCGACAAC AACGTGCGTG GCTTCAAGAG CAACTTCGTC
ATGCACTGCG CGAAGTACGA AACCAAGATT CCCATCGCTG AGCCCGAGGC CGGCTGA
 
Protein sequence
MQLDRRDIQL LNLMQDDATL PLRALAERVH MSVATCQRRI AQMRAEGILL RQVALVDRVR 
VGRPLTVFVW VELDRQHSAA LRDFERKMSA EPDVLACYEI SGEADFLLSV NAASMEAYHA
FTRRVFIADN NVRGFKSNFV MHCAKYETKI PIAEPEAG