Gene RSc2792 details

Gene Information

• Locus tag: RSc2792
• ID: 1221639
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 3002559
• End bp: 3003026
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637239193
• Product: putative outer membrane lipoprotein transmembrane
• Protein accession: NP_520913
• Protein GI: 17547511
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3133] Outer membrane lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00797712
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.981386
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACACCA CCCTTCGCAT CGGCGCCGCC GCCCTGCTGG TCACGGCCCT CGGCCTGCAA 
GGTTGCGCCA CGGGCAGCAA CTCCAACAGC GCTTACACGT CCTACCAGGC ACAGCGCGAG 
CAGACCGTAC GCTTCGGCAC CGTGGAGTCG GTCCGCAATG TCGTGATCGA CCGTGAACAG 
ACCGGTGTCG GCACGCTGGC CGGCGGTGCG GTCGGTGGCA TCGGTTCGGC AGCGGCCATC 
GGGCGCGGCA ACGGCTCGGT GGCGGCAGGC ATCCTGGGCG CCATCGCGGG CGGCATCGCC 
GGCAGCGCCA TCGAGGGCCA GGTGAACAAG CGCCCGGGCC TGGAGATCAC CGTCAAACTG 
GACAACGGCG AGTACCGCGC CATCACGCAG GAAGCGGACG AAGCGTTCCG CCCCGGCGAA 
CGGGTGCGCC TACTGTCGTC GGGCGGCGTG ACCCGCGTGA CGCACTGA 

 

Protein sequence

MNTTLRIGAA ALLVTALGLQ GCATGSNSNS AYTSYQAQRE QTVRFGTVES VRNVVIDREQ 
TGVGTLAGGA VGGIGSAAAI GRGNGSVAAG ILGAIAGGIA GSAIEGQVNK RPGLEITVKL 
DNGEYRAITQ EADEAFRPGE RVRLLSSGGV TRVTH