| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2784 |
|---|
| Symbol | |
|---|
| ID | 1221631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2995284 |
|---|
| End bp | 2995808 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637239185 |
|---|
| Product | putative thioredoxin-related transmembrane protein |
|---|
| Protein accession | NP_520905 |
|---|
| Protein GI | 17547503 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.744775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAC GCCAAACCCT GATCGCCCTC ATCCTGGCCG GCATCGTCGC CGCGGTGCTG
GGCGTGTACG CCGGCCATCG GGCCACGCAG CCCAGGCCGC CGGCCGACGG TGCCGTCACC
GCGTTCTTCG ATGCCAGGCT GCCGGACGCC AACGGCACGC CGATCGACCT CTCGGCATTC
CGCGGCCAGC CGGTGGTGAT CAATTTCTGG GCGCCCTGGT GCGGCCCTTG CGTGGAGGAG
ATGCCGGAGC TGTCGGCGTT GGCGCAAGAG CAGAAGGCCC GGGTGAAGTT CATCGGGATC
GGAATCGATT CGGCGGCCAA CATTCAGGCG TTCCTGGGCA AGGTGCCGGT CACCTACCCC
ATCGCCGTGG CCGGTTTCGG AGGCACCGAA TTGGGGCGGC AGCTCGGCAA CCAGGCCGGC
GGCCTGCCCT TTACCGTGAT TCTGAATGCA CAGGGCGAGA TCACGTTCCG CAAGATGGGC
CGCGTCCACG CCGACGAACT GCGTGCCGCC TTGCAGCGTA CGTGA
|
|---|
| Protein sequence | MSRRQTLIAL ILAGIVAAVL GVYAGHRATQ PRPPADGAVT AFFDARLPDA NGTPIDLSAF
RGQPVVINFW APWCGPCVEE MPELSALAQE QKARVKFIGI GIDSAANIQA FLGKVPVTYP
IAVAGFGGTE LGRQLGNQAG GLPFTVILNA QGEITFRKMG RVHADELRAA LQRT
|
|---|
| |