| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2777 |
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| Symbol | aroE |
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| ID | 1221624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2987691 |
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| End bp | 2988611 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637239178 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | NP_520898 |
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| Protein GI | 17547496 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.371956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATCGT TTGAACAGGC GGCCATTCTC GCGGCCGCCA GCGCCCCGCC AGTCGATCGC
TACGGTGTGA TCGGCAATCC GATCTCGCAC AGCAAGTCGC CGGCCATCCA TGCCGCCTTT
GCGCAGCAGA CCGGCCAGCT GATGCGCTAT GAGCGCATCT ATGCCGAGCT GATTGCCTTT
GACGAGACCG TGTTCTCGTT CATCCGTGAG GGCGGGCGGG GGCTCAATGT GACGGTGCCG
TTCAAGCTCG ATGCGTACGC ACTGGCGACC TCGCTGTCGC TGCGTGCGGA GTCGGCCGGC
GCCGTCAACA CCCTCAAGTT CGACGGCGAT GCGATTTTCG GCGACAACAC CGATGGCGTC
GGCCTGATGC GCGATATCAC GCACAACATC GGCAACCCGC TGGCGGGTGA GCGCGTGCTG
CTGCTCGGCG CGGGCGGCGC GGCGCGCGGC ATCCTGCTGC CGCTGCTGGA GCACAAGCCG
TCGCGCGTGT TCATCGCCAA TCGCACAGCC GATCGCGCCA TCGGGCTGGT GCAGCGCTTC
GAGGCAGCGG CCAAGCTGCA CGAGGTCGAG CTGGTGGGCG GCGGCTTCGA CGACCTGGCC
GTCAGCGACG TCTTCGATGT CGTCATCAAC GCGACCGCGG GCAGCCTGCA GGCCCAGGTG
CCGCCCATCG AGCCGACCGT GTTCGGCCCC AACGCGCTGG CCTACGACAT GATGTACGGC
TCGCAGCCGA CGGTGTTCAT GCAGTTCGCC AAGCGGCATG GTGCCCGCGC GTGGGACGGC
CTGGGCATGC TGGTGGAGCA GGCGGCGGAA TCGTTCCTGG TCTGGCGCGG CATGCGCCCC
GACACCGCCC CCGTGCTACA AGCCATGCGC GAGGGGCTGC AGGGCGAGGC GGCCGTGGCC
GCGCGCGCGC ATCAGCGCTG A
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| Protein sequence | MISFEQAAIL AAASAPPVDR YGVIGNPISH SKSPAIHAAF AQQTGQLMRY ERIYAELIAF
DETVFSFIRE GGRGLNVTVP FKLDAYALAT SLSLRAESAG AVNTLKFDGD AIFGDNTDGV
GLMRDITHNI GNPLAGERVL LLGAGGAARG ILLPLLEHKP SRVFIANRTA DRAIGLVQRF
EAAAKLHEVE LVGGGFDDLA VSDVFDVVIN ATAGSLQAQV PPIEPTVFGP NALAYDMMYG
SQPTVFMQFA KRHGARAWDG LGMLVEQAAE SFLVWRGMRP DTAPVLQAMR EGLQGEAAVA
ARAHQR
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