| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2776 |
|---|
| Symbol | mtgA |
|---|
| ID | 1221623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2986968 |
|---|
| End bp | 2987672 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637239177 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | NP_520897 |
|---|
| Protein GI | 17547495 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.371956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCT GGCTCGGCTA CGTGATCGGC TGCTTTGCGG CGGGCGTGGT CGCGCTCAAC
CTGTATTTCT TCGCCGCCAT CGCCAGTTGG CAGGTCTTCA ATCCCGCCTC GTCGGCGTTC
ATGCGGGCCG AGCGGATGCG GCTGTGCGGT GCCAATCTCG TCACCTGCGG GATCGACCAT
CGCTGGGTGC CGTACGACCA GATCTCGCGC AACCTCAAGC GCGCCGTCAT CGCCAGCGAG
GACGCCGATT TCGTCTCGCA TTCCGGCTGG GAAGTCGACG CCATGCTCGA CGCCTGGGAA
AAGAACAAGC GGCGCGGCCA CGTGGTGGCG GGCGGCTCGA CCATCACGCA GCAGCTGGCC
AAGAACCTGT TCCTCTCCGG CGAGCGCCAC TACCTGCGCA AGGGCGAGGA GCTCGTTATC
ACGTGGATGC TGGAGTTCTG GCTCGACAAG GAGCGCATCC TGGAGATCTA CTTGAATTCG
GTGGAGTGGG GCGAGGGCGT CTTCGGCGCC GAGGCGGCGG CGCAGCATTA CTTCAAACGG
CCGGCATCGC AATTGACGGT GGGCCAGGCC GCGCGACTGG CCGCGGCGCT GCCGGCGCCC
AAGTGCTTCG ACAAGAAGCG CTACTGCGCC AATGTTCACA TCAGTTTCAC GCGCAAGGCG
ACGGTCATCG CCAACCGGAT GGGCTCGGCG ACCCTGCCGG ACTGA
|
|---|
| Protein sequence | MMRWLGYVIG CFAAGVVALN LYFFAAIASW QVFNPASSAF MRAERMRLCG ANLVTCGIDH
RWVPYDQISR NLKRAVIASE DADFVSHSGW EVDAMLDAWE KNKRRGHVVA GGSTITQQLA
KNLFLSGERH YLRKGEELVI TWMLEFWLDK ERILEIYLNS VEWGEGVFGA EAAAQHYFKR
PASQLTVGQA ARLAAALPAP KCFDKKRYCA NVHISFTRKA TVIANRMGSA TLPD
|
|---|
| |