| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2775 |
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| Symbol | popW |
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| ID | 1221622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2985681 |
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| End bp | 2986823 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239176 |
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| Product | HARPIN-like protein |
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| Protein accession | NP_520896 |
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| Protein GI | 17547494 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.396388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCC AGATTGATCG CCCGAACAAC CATTTCCAGA CGCCCTCGAC GTGGAATCAC
GATGCGGGTT CCAGTATCGA TACCAGCCAG CTCCAGCGCG CAGTACAACT GCTCGACCAG
GTCTTGCAGC AGCTCGAAGC GCGCAAGCTG TTCGGGAACA TGCTGAACCA GCCGGGCGCC
GACAACGCCG GCCAGAACCA CGCTGGCGGC CACGGCGGCG GTCATCATGG CGGCTCGAAC
GGGTTCGGTG AAAACGGCCG CTTCGGTTCG CCGCACGCCA ATTCGCCTGC GCAGCCGGAC
CTCGAACTGC CGGCCAACAA GCCCAACAAC GGCAAGCACA ACACTTCGGC TTCCACGCCG
GACACGCAGA CGGCGCCGTC TTCCACTTCG CCCACGACCG GCACGTCCCC GACGCCCACG
TCCACCTCCG CGACCGAGGG CAAGGTGGCC TACGGCGTCA AGCCGCCCGA GCCGACCGGC
GTGGTCGACG TCAGCAAGCC GATCGTCGTC AAGGCTGGCG AGACGTTCGA CGGCGGCGGC
AAGTACTACC GCCCGACCAA GGAGATGGGC GACGGTTCGC AGAACGAGCA CCAGAAGCCG
CTGTTCATTC TGGAGCCCGG CGCGACGCTC AAGAACGTGC AGTATTCCGG CGGCGACGGC
ATCCACCTGC TGGGCAGTGC CAAGCTGGAC CGCGTCGTGA ACCGCCAAGT GGGCGAAGAT
GCCATCACCA TCGATGGCGC CAAGAACCGC GCGCATGATG CCAAGATCGC CGGGATCGAT
CCGGCGTCGA TCCCCGGAGG AACGCCCAAA GTGGAGATCA CCAACAGCGC CTTCTATGGC
GCCAAGGACA AGCTCGCTCA GATCAACGGC GACGTTGACC TGCAGGTGAA AGGCATGTAT
GTCAACGGCG CTGGCAAGGT CTTCCGTACC AACGGTGGTG ATACGCAGAT CAAGGCGACG
GTCAACGTCC AGGATTCGAA TTTCCAGAAC GTGTCGGAGG CGGTTTTCCG GACCGATTCC
AAGTTCTCGA CTGCGTCGTT CTCGGACGAT GTGAAATCGG ATGCGCCCTT CGATGGACTG
GCTCCCGACA AGAGCCAAGT CACAGGCACC AACAAGGTGA GCTACAAGGC CTACTCGGGC
TGA
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| Protein sequence | MSIQIDRPNN HFQTPSTWNH DAGSSIDTSQ LQRAVQLLDQ VLQQLEARKL FGNMLNQPGA
DNAGQNHAGG HGGGHHGGSN GFGENGRFGS PHANSPAQPD LELPANKPNN GKHNTSASTP
DTQTAPSSTS PTTGTSPTPT STSATEGKVA YGVKPPEPTG VVDVSKPIVV KAGETFDGGG
KYYRPTKEMG DGSQNEHQKP LFILEPGATL KNVQYSGGDG IHLLGSAKLD RVVNRQVGED
AITIDGAKNR AHDAKIAGID PASIPGGTPK VEITNSAFYG AKDKLAQING DVDLQVKGMY
VNGAGKVFRT NGGDTQIKAT VNVQDSNFQN VSEAVFRTDS KFSTASFSDD VKSDAPFDGL
APDKSQVTGT NKVSYKAYSG
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