Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2754 |
Symbol | |
ID | 1221601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2965537 |
End bp | 2966427 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637239155 |
Product | hypothetical protein |
Protein accession | NP_520875 |
Protein GI | 17547473 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.494847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGTAT TCCGGCTTGA CAATGGCGTG CTGCGCGCCG ACGTGCTGCC CGGCGCGGGC GGCGGCCTGC TGCGCTTCGA CGCCTGGCGC GACGGCGGGC CGGTGCCGGT GTTCCGCACC GGCCGCCTCG ACGATGCGCT GCGCGAGCCC AACGCGCTGG CGTGCTACCC GCTGGTGCCC TGGTCGAACC GCATCGGCGG CGGCCGCTTC GCGTTCGATG GCCGTGTCGT CGAAGTCCCG CGCACTCGCG ATGACGAACC GTATCCCCTG CACGGACACG GCTGGCGCAT GCCCTGGCAG CCGGTGGCCC ACGACGGACA CCGGATCGAA CTGGCCGCGC GGGTCGGGCA CGGGCAGCCG TTTCGCTATC GCGCGCGGTT GCGCTACGTG CTGGCGGCCG ACACGCTGAG GATGACGCTG ATCGTGCGCA ACGAAGGCGA GCCGCTGCCG TTCGGGCTGG GCGTGCATCC CTTTTTCCCG CGCACGGCCG ACGTGCGGCT GCTCGCGCCC GCGACCGGGA TGTGGGACGC CGCCGCCGAC CATCTGCCGA CCGCGCTGCG GATGCCGCCG CCCTGCGCCG CATTCGGCGC GTCGCGGACA CTCGCGGCCG ATGCCGGGAT CGACCACGGC TTCGAAGGCT GGAGCGGCCG CGCCGAGATC GTCTGGCCGG GCCGCCGGCT GTCGGTGGCG ATCGTCGCCG CGACGTCGCG CTACGTGCTG TACACCCCGC CCGGGTCGGA TGTCTTCTGC TTCGAACCGG TCGACCACGC CATCAACGCG CACAACCTGC CGGGCCGGCC GCAGGACCAC GGCCTGACCG TGCTGGCCAC CGGCCAGAGC CTGCGGCGCG ACTATCGCTT CACCGTCACC CCTTTCCGGA CCGACACATG A
|
Protein sequence | MPVFRLDNGV LRADVLPGAG GGLLRFDAWR DGGPVPVFRT GRLDDALREP NALACYPLVP WSNRIGGGRF AFDGRVVEVP RTRDDEPYPL HGHGWRMPWQ PVAHDGHRIE LAARVGHGQP FRYRARLRYV LAADTLRMTL IVRNEGEPLP FGLGVHPFFP RTADVRLLAP ATGMWDAAAD HLPTALRMPP PCAAFGASRT LAADAGIDHG FEGWSGRAEI VWPGRRLSVA IVAATSRYVL YTPPGSDVFC FEPVDHAINA HNLPGRPQDH GLTVLATGQS LRRDYRFTVT PFRTDT
|
| |