Gene RSc2750 details

Gene Information

• Locus tag: RSc2750
• Symbol: tktA
• ID: 1221597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: -
• Start bp: 2960819
• End bp: 2962846
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637239151
• Product: transketolase
• Protein accession: NP_520871
• Protein GI: 17547469
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCCGCTC CCGCCCTCCA TTCGATCACC TCACTGCCCA CCCAGCAGAT GGCCAATGCC 
ATCCGCGTGC TTGCGATGGA CGCCGTCCAG CAAGCCAACT CGGGCCACCC CGGCATGCCG 
ATGGGCATGG CGGACATCGC CGTGGCGCTG TGGAGCCGCC ACCTGCGCCA CAACCCGGCG 
AACCCGCACT GGCCCGACCG CGACCGCTTC GTGCTGTCCA ACGGCCACGG TTCGATGCTG 
CTGTACGCGC TGCTGCACCT GACCGGCTAC GACCTGCCGA TGTCGGAACT GAAGAACTTC 
CGCCAGCTGC ACAGCAAGAC CGCCGGCCAC CCCGAATACG GCATCACGCC GGGCGTGGAA 
ACCACCACCG GCCCGCTGGG GCAGGGCCTC ACCAACGCGG TCGGCATGGC GCTGGCCGAG 
CGCCTGCTGG GCCAGGAATT CAACCGTCCC GGCTTCGACA TCGTCAACCA CCACACCTAC 
GTCTTCCTGG GTGACGGCTG CCTGATGGAA GGCATCAGCC ACGAAGCCTG CTCGCTGGCC 
GGCACGCTCG GTCTGAACAA GCTGATCGCG CTGTGGGACG ACAACGGCAT CTCGATCGAC 
GGCGACGTCG TCCACTGGTT CAACGACGAC ACGCCCAAGC GCTTCGAAGC CTATGGCTGG 
AATGTGATCC GCGCCGTCGA CGGCCACAAT GTCGCCGCCG TGGAAGCCGC CATCGCGCAG 
GCCAAGACGT CCGACAAGCC GACCCTGATC TGCTGCCGCA CCGTGATCGG CAAGGGCGCG 
CCCACCAAGG CGGGCGGCCA CGACGTGCAT GGCGCGCCGC TGGGCGGTGC CGAGATCGCC 
GCCGCGCGCG AGGCGCTGGC CTGGCCGCAT GCGCCGTTCG ACGTGCCGCA GGCCGTGTAC 
GACGCGTGGG ATGCGCGCGG CCAGGGTCAG GCGCTCGAAA AGGCCTGGAA CGCACTGTTC 
GATGCCTATG CCGAGCGCTA TCCGGCCGAA GCCGGGCAGT TCCAGCGCCG CATGCGCGGC 
CAGTTGCCGG AAGCCTTCGA GCAGGCCGCC GCCGAATTCA TCGAGAAGTG CGAGCTGAAG 
GCCGAGACCA TCGCCACCCG CAAGGCCAGC CAGAACACGC TGGAAGCCTA CGGCCCGGTG 
CTGCCTGAGC TGCTGGGCGG CTCGGCCGAC CTGACCGGCT CGAACCTGAC CAACTGGAGC 
GGCAGCAAGG CCGTGCGCGT GGATGCCTGG GGCAACCACG TCAACTACGG CGTGCGCGAG 
TTCGGCATGA GCGCCATCAT GAACGGCATC GCGCTGCACG GCGGCTACAT CCCGTACGGC 
GGCACGTTCC TGACCTTCTC CGACTACAGC CGCAACGCGC TGCGCATGGC GGCGCTGATG 
AAGCTCCGCT CGCTGTTCGT CTTCACGCAC GATTCCATCG GCCTGGGCGA AGACGGCCCG 
ACGCACCAGT CGATCGAGCA CGTCGCCAGC CTGCGCCTGA TCCCGAACAT GGACGTCTGG 
CGCACGGCCG ACACCACTGA AACCGCCGTC GCCTGGGCCG CCGCCATCGC GCGCCAGAAC 
GGCCCGAGCT GCCTGATCTT CAGCCGCCAG AACCTGCCGT TCCAGGCGCG CAACCCGGCC 
ACCCGCGAAG CCATTGCCCG AGGCGGTTAT GTGCTGCGCG ATGCGACCGA AGGCAAGCGC 
CCGGACGTGG TCATCATCGC CACCGGCTCG GAAGTGGGCC TGGCCGTCGG CGCCGCCGAG 
CACCTCGCCG CCGAGGGCAT CCAGGCGCGC GTGGTGTCGG TGCCGTCGAC CACCGTGTTC 
GACAAGCAGG ACGCCGCCTA CAAGGCCAGC GTGCTGCCGG CCGGCGTGCC GCGCATCGCC 
GTCGAGGCGG GCGTGACCGA TTTCTGGTGG AAGTACCAGG TGCAGGCCGT CGTCGGCATC 
GACACGTTCG GCGAGTCGGC CCCGGCGGGC GTGCTGTTCA AGCACTTCGG CTTCACCGTC 
GAGAACGTGG TGAACACAGC CAAGAGCGTC ATCGCTCCGG CTGTCTGA 

 

Protein sequence

MSAPALHSIT SLPTQQMANA IRVLAMDAVQ QANSGHPGMP MGMADIAVAL WSRHLRHNPA 
NPHWPDRDRF VLSNGHGSML LYALLHLTGY DLPMSELKNF RQLHSKTAGH PEYGITPGVE 
TTTGPLGQGL TNAVGMALAE RLLGQEFNRP GFDIVNHHTY VFLGDGCLME GISHEACSLA 
GTLGLNKLIA LWDDNGISID GDVVHWFNDD TPKRFEAYGW NVIRAVDGHN VAAVEAAIAQ 
AKTSDKPTLI CCRTVIGKGA PTKAGGHDVH GAPLGGAEIA AAREALAWPH APFDVPQAVY 
DAWDARGQGQ ALEKAWNALF DAYAERYPAE AGQFQRRMRG QLPEAFEQAA AEFIEKCELK 
AETIATRKAS QNTLEAYGPV LPELLGGSAD LTGSNLTNWS GSKAVRVDAW GNHVNYGVRE 
FGMSAIMNGI ALHGGYIPYG GTFLTFSDYS RNALRMAALM KLRSLFVFTH DSIGLGEDGP 
THQSIEHVAS LRLIPNMDVW RTADTTETAV AWAAAIARQN GPSCLIFSRQ NLPFQARNPA 
TREAIARGGY VLRDATEGKR PDVVIIATGS EVGLAVGAAE HLAAEGIQAR VVSVPSTTVF 
DKQDAAYKAS VLPAGVPRIA VEAGVTDFWW KYQVQAVVGI DTFGESAPAG VLFKHFGFTV 
ENVVNTAKSV IAPAV