Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2733 |
Symbol | pntB |
ID | 1221580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2940154 |
End bp | 2941614 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239134 |
Product | transmembrane NADP transhydrogenase subunit beta oxidoreductase protein |
Protein accession | NP_520854 |
Protein GI | 17547452 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGA ACCTCGTCAC CCTGCTGTAC CTGCTGGCGT CGGTCTGCTT CATCCAGGCG CTCAAGGGCC TGTCGCACCC GGGCACTGCG CGACGCGGCA ATGTGTTCGG CATGAGCGGC ATGGCGATCG CGGCGGTCAC CACCATCGCG CTCATCTACA AGCTCAAGGC CGAGATGTTC GCCGACACCG AGAGCGGCAC GGCCACGGGC TTTCTGCTGA TCTTCGCCGG GCTGGTGGCG GGCGGCGGCA TCGGCGCCTA CGTCGCGCGC ACGGTCGAGA TGACCAAGAT GCCCGAACTG GTGGCGGCCA TGCACTCGCT GATCGGCCTG GCGGCGGTCT GCATCGCCGT CGCGGCGGTG GCCGAGCCCG CGGCCTTCGG CATCACGCTG GCCGGCGACA ACGTGCTGCC GCTGGGCAAC CGCGTCGAGC TGTTCATCGG CACCTTCGTC GGCGCCATCA CCTTCTCCGG TTCGGTGATC GCCTTCGGCA AGCTGTCGGG CAAATACAAA TTCCGCCTGT TCCAGGGCGC GCCGGTGCAG TTCGCCGGCC AGCACATGCT GAACCTGCTG CTGGCGCTGG CCATGCTGGG CTTCGGCGTG CTGTTCTTCC TGTCCCAGAG CTGGCTGCCG TTCGTCATCA TGACGGCCAT CGCCTTCGCA CTGGGCGTGC TGATCATCAT CCCCATCGGC GGCGCCGACA TGCCGGTGGT GGTGTCGATG CTGAATTCCT ACTCGGGCTG GGCCGCGGCG GGCATCGGCT TCTCGCTGAA CAACCCGATG CTGATCATCG CCGGCTCGCT GGTCGGCTCT TCCGGCGCGA TCCTGTCGTA CATCATGTGC CGGGCGATGA ACCGGTCGTT CTTCAACGTG CTGCTGGGCG GCTTCGGCTC GGAAGCGTCG GCCGGGGCCG CAGCAAGTGG CGACGGCCAG CAGCGCGCCG TCAAGTCGGG CTCGCCGGAC GACGCCGCCT TCCTGCTGGG CAACGCCGAG ACCGTCATCA TCGTGCCCGG CTACGGCCTG GCGGTGGCGC GCGCGCAGCA CGCCCTCAAG GAGCTGACCG AGCTGCTGGC CGAGAAGGGC GTGACGGTCA AGTACGCCAT CCATCCCGTC GCCGGCCGCA TGCCGGGCCA CATGAACGTG CTGCTGGCCG AGGCCGAGGT GCCGTACGAC CAGGTCTTCG AGATGGAAGA CATCAACAGC GAGTTCGGCC AGGCCGACGT GGTGCTGGTG CTGGGCGCCA ACGACGTGGT CAACCCGGCC GCCAAGAACG ACCCGAAATC CCCCATTGCC GGCATGCCGA TCCTGGAGGC CTACAAGGCC AAGACCATCA TCGTCAACAA GCGCTCGATG AACGCCGGAT ACGCCGGGCT GGACAACGAG CTCTTCTACA TGGACAAGAC CATGATGGTG TTCGGCGATG CCAAGAAGGT GGTCGAAGAC ATGGTCAAGG CGGTGGACTG A
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Protein sequence | MSMNLVTLLY LLASVCFIQA LKGLSHPGTA RRGNVFGMSG MAIAAVTTIA LIYKLKAEMF ADTESGTATG FLLIFAGLVA GGGIGAYVAR TVEMTKMPEL VAAMHSLIGL AAVCIAVAAV AEPAAFGITL AGDNVLPLGN RVELFIGTFV GAITFSGSVI AFGKLSGKYK FRLFQGAPVQ FAGQHMLNLL LALAMLGFGV LFFLSQSWLP FVIMTAIAFA LGVLIIIPIG GADMPVVVSM LNSYSGWAAA GIGFSLNNPM LIIAGSLVGS SGAILSYIMC RAMNRSFFNV LLGGFGSEAS AGAAASGDGQ QRAVKSGSPD DAAFLLGNAE TVIIVPGYGL AVARAQHALK ELTELLAEKG VTVKYAIHPV AGRMPGHMNV LLAEAEVPYD QVFEMEDINS EFGQADVVLV LGANDVVNPA AKNDPKSPIA GMPILEAYKA KTIIVNKRSM NAGYAGLDNE LFYMDKTMMV FGDAKKVVED MVKAVD
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