| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2729 |
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| Symbol | |
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| ID | 1221576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2935826 |
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| End bp | 2937895 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239130 |
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| Product | putative ferrichrome-iron receptor protein |
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| Protein accession | NP_520850 |
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| Protein GI | 17547448 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGT TCGGCGCACC CGAACCGGCC GCCGCAGACG ATGTTCCGAC GCTGGCGCTG
GAGGAGGCCG TCGTCCGCGC GCAGGCGGGC GAGCGCTTGC GGGCCCGGCG CGCAACTTCC
GCCACGCTGA CCGACACGCC GCTCAAGGAC GTGCCGCAGT CCGTCGGCGT GGTCACGCGC
GCGGCGCTGG ACGGCTTCGG CGCGACGCGG CTGGACACGG CGCTCGACTG GGTCAGCGGC
ATCAGCCGGC AGAACAACCT GGGCGGCATC GCCGACAACT TCGCCATCCG CGGCTTTGCC
GGCGACCTGA ACACGGGCTC GGACTACCTC GTCAACGGTT TTTCGGCCAA CCGCGCCAAC
AGCGTGCCGG TGGACACCAT CAACATCGCG CGCATCGACG TGCTGAAGGG GCCGTCGGCG
GCGCTTTACG GGCGCAGCGA TCCGGGCGGC ATCGTCAACA TCGTCACGCG CACGCCGCAG
TTCAAGCCGT CGCGCGAGAT CACGCTGGCG GCGGGCAGCC ACGACCAGTA CCGGCTGGCG
ACCGAACTGA CCGGGCCGCT GTCCGGGCAC TTCGCCTACC GGCTGGGCCT GGCAGCGGAG
AACAATCACG GCTTCCGGGA GTTTTCCGCC AGCCGGCGCT ATGTGATTGC GCCATCGTTC
ACGTGGCTGC CCACCGACGA CACCGTGGTG ACCTATGCCT TCGAGGCGGC GCAGCTCAGG
GCACCGTTCG ACCGGGGCAT CGTGGCGATC AACCGGCAGT TGGGGGCGTT GCCCGATTCG
CGCTTCCTGG GCGAGCCGGG CGACGGCGAT ACCACGGTGC GCACGCAGAG CCACCAGCTG
AGCGTCGAAC ACCAACTGGG CAGCGGCTGG AAAGTGGACG CCGGGCTGTC GTACCGCACC
TCGCGCCTGT TCGGCAAATC GTCCGATGCG TCGCGGCTGC TCGACGATGG CCGCACGCTG
TGGCGGCAGG CGCGCGAGCG CGACTACCAC GCCAACGATC TGGCCGGCCG CGTCGACCTG
CAGGGCGAGG TGGCCACCGG ACCCGTCAGG CACACGCTGG TGGCCGGCGC CGACTTCTAC
AACTTCCGCT ACGACCCGGT GCTGTACCGC GCCAACCCGA GCGCATCGGC GCCGTATGCG
ATCGACATCT TCGATCCCGT GTACGGCCAG CCGCGGCCCG CGCTGCGGCC GAGCAGCAGC
ACGCGCGAGT CCCAGCGCGG CTTCGGCGCC TTCGTGCAGG ACCAGGTCAC GCTGACGCCG
CAGTGGAAAC TGCTGGCCGG CGTGCGCATG GACCGCTTCC TGCAGCACGC CGACAACCGC
CTGACCGGCG CGCGCGTCGC GCAGCAGCAG ACCGCCTACA GTCCGCGCCT GGGGCTGGTC
TACCAGCCGA CGCAGACCCT GTCGCTGTAC GCCAATACCG CGCGCTCGTT CCGGCCCAAC
ACCGGGGTGG GGGCGCAGGG CAATGCGTTC GCGCCGGAGC GCGGGCGCGG CTACGAGGTC
GGCGCCAAGC TGGAGACGGC CGACGGCCGG TTCGGCGGCA CGCTGGCGCT GTATTCGATC
GACAAGACCA ACGTGCTGAC CGGCGATTCG CGCGATCCGG TGTTCCAGCG CACCGCCGGC
GCGGTGCGCA GCCGGGGCGT CGAGCTCGAT GTGTCCGGCC AGCTGACGCC GAACCTCAAG
GTGCTGGGCA CCTACGCCTA TACCGACGCC CGTGTGACGG CGGACACCGT GCTGCCGTCG
GGCGCGCCGC TGTCCAACAT CCCGCGCCAC AGCGCCAGCG CGCTGGGCCT GTATGAATTC
GGCGCGGGAT CGCTGGGCCG GGCGGGCGTG GGTGGCGGCG TGGTCTACGT CGGCGAGCGC
GCCGGCAACA GCACCGATAA CGGCTTCAAG CTGCCGGCCT ACGCCACCGT CCGCCTGAAC
GGCTACGTGC AGCCGACGCG CGCGCTGCGC CTGTCGCTGA CCATCGACAA CCTGTTCGAC
AAGCGCTACT ACGCCAGTTC GTACAACGAG CTGTGGGTCG CGCCCGGCGC CGAGCGGCAA
GTCACGCTGG CGGCCACCTA CACATTTTGA
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| Protein sequence | MALFGAPEPA AADDVPTLAL EEAVVRAQAG ERLRARRATS ATLTDTPLKD VPQSVGVVTR
AALDGFGATR LDTALDWVSG ISRQNNLGGI ADNFAIRGFA GDLNTGSDYL VNGFSANRAN
SVPVDTINIA RIDVLKGPSA ALYGRSDPGG IVNIVTRTPQ FKPSREITLA AGSHDQYRLA
TELTGPLSGH FAYRLGLAAE NNHGFREFSA SRRYVIAPSF TWLPTDDTVV TYAFEAAQLR
APFDRGIVAI NRQLGALPDS RFLGEPGDGD TTVRTQSHQL SVEHQLGSGW KVDAGLSYRT
SRLFGKSSDA SRLLDDGRTL WRQARERDYH ANDLAGRVDL QGEVATGPVR HTLVAGADFY
NFRYDPVLYR ANPSASAPYA IDIFDPVYGQ PRPALRPSSS TRESQRGFGA FVQDQVTLTP
QWKLLAGVRM DRFLQHADNR LTGARVAQQQ TAYSPRLGLV YQPTQTLSLY ANTARSFRPN
TGVGAQGNAF APERGRGYEV GAKLETADGR FGGTLALYSI DKTNVLTGDS RDPVFQRTAG
AVRSRGVELD VSGQLTPNLK VLGTYAYTDA RVTADTVLPS GAPLSNIPRH SASALGLYEF
GAGSLGRAGV GGGVVYVGER AGNSTDNGFK LPAYATVRLN GYVQPTRALR LSLTIDNLFD
KRYYASSYNE LWVAPGAERQ VTLAATYTF
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